Stem-loop sequence mtr-MIR2592aj

Accession MI0018272
Description Medicago truncatula miR2592aj stem-loop
Gene family MIPF0000815; MIR2592
Stem-loop 
caguu  -  u            c           g  a            aua        ------a             a          c    a          uc          gaa           cag   u c         u      c     ccaccgaa ug   uu 
     gg aa gugcauuucaac acaacaauugu uu ccuuugaauggg   aauucaaa       aacaacaggacuc agcauuucgc aagc cuucauguuu  ccuuugaaaa   uaaauuuuugu   gcu g uuuagauga gguauu aagug        u  agg  c
     || || |||||||||||| ||||||||||| || ||||||||||||   ||||||||       ||||||||||||| |||||||||| |||| ||||||||||  ||||||||||   |||||||||||   ||| | ||||||||| |||||| |||||        |  |||   
     cc uu cacguaagguug uguuguuaaca aa ggaaacuuaccc   uuaaguuu       uuguuguccugag ucguaaagcg uucg ggaguacaaa  ggaaacuuuu   auuuaagaaca   cga c aaaucuacu ccauaa uucac        a  ucc  a
-aauc  a  c            a           g  -            -ca        gaacagc             c          -    c          ga          aua           aua   c -         u      -     -------- gu   ua
Get sequence
Genome context
Coordinates (Mt3.0) Overlapping transcripts
MtChr6: 1271674-1272018 [+]
intergenic

Mature sequence mtr-miR2592aj

Accession MIMAT0021166
Sequence

65 -  

caacaggacucaagcauuucgc

 - 86

Get sequence
Evidence experimental; Solexa [1]

References

1
PMID:21571671 "Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis" Devers EA, Branscheid A, May P, Krajinski F Plant Physiol. 156:1990-2010(2011).