Stem-loop sequence mtr-MIR5205a

Accession

MI0018240 (change log)

Description

Medicago truncatula miR5205a stem-loop

Literature search

1 open access papers mention mtr-MIR5205a
(1 sentences)

Stem-loop

   -uaugaaauac    aa   ca    -        c   gg   ga 
5'            ccaa  cau  uaca auuuggga gga  gag  a
              ||||  |||  |||| |||||||| |||  |||  g
3'            gguu  gua  gugu ugaauucu cuu  uuc  g
   uucaaaccuua    ga   ag    a        -   ag   aa 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (JCVI_Mt3.5.2): chr8: 21198741-21198832 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0018240

Mature sequence mtr-miR5205a

• Accession: MIMAT0021133
• Sequence: 20 - cauacaauuugggacggagggag - 42
• Evidence: experimental; Illumina [1]

References

1. PMID:21571671 "Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis" Devers EA, Branscheid A, May P, Krajinski F Plant Physiol. 156:1990-2010(2011).