Stem-loop sequence hsa-mir-5195

Accession

MI0018174

Description

Homo sapiens miR-5195 stem-loop

Stem-loop

-     aaa   --ag      a  ug     guuccuaa     a   c           aga 
 gagca   acc    agaaca ca  ggagc        ccccu agg aacuggauggg   c
 |||||   |||    |||||| ||  |||||        ||||| ||| |||||||||||    
 cuugu   ugg    ucuugu gu  ucucg        gggga ucu uugaccuaccc   c
a     ---   aaca      -  gu     --------     g   c           agu 

Deep sequencing

3 reads, 3 experiments

Genome context

• Coordinates (GRCh37.p5): chr14: 107259100-107259214 [-]
• Overlapping transcripts:

  intergenic

Mature sequence hsa-miR-5195-5p

• Accession: MIMAT0021126
• Sequence: 36 - aaccccuaaggcaacuggaugg - 57
• Evidence: experimental; Solexa [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-5195-5p
  • MIRDB:hsa-miR-5195-5p
  • TARGETMINER:hsa-miR-5195-5p

Mature sequence hsa-miR-5195-3p

• Accession: MIMAT0021127
• Sequence: 70 - auccaguucucugagggggcu - 90
• Evidence: experimental; Solexa [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-5195-3p
  • MIRDB:hsa-miR-5195-3p
  • TARGETMINER:hsa-miR-5195-3p

References

1. PMID:21606961 "Discovery of new microRNAs by small RNAome deep sequencing in childhood acute lymphoblastic leukemia" Schotte D, Moqadam FA, Lange-Turenhout EA, Chen C, van Ijcken WF, Pieters R, den Boer ML Leukemia. 25:1389-1399(2011).