Stem-loop sequence hsa-mir-5194

Accession

MI0018173

Description

Homo sapiens miR-5194 stem-loop

Stem-loop

au   uu   -   aacuuaa    ag    u   gg        --u   a        uugg 
  uuc  ugg guu       acuc  cccu cua  cccauucu   uuc cucaggaa    a
  |||  ||| |||       ||||  |||| |||  ||||||||   ||| ||||||||    u
  aag  acc cag       ugag  ggga ggu  ggguaagg   ggg gagucuuu    a
--   -u   a   --accac    -a    c   -a        uuu   -        ucga 

Deep sequencing

4 reads, 4 experiments

Genome context

• Coordinates (GRCh37.p5): chr8: 131020580-131020699 [-]
• Overlapping transcripts:

  sense

  OTTHUMT00000380385 ; FAM49B-006; intron 1

  OTTHUMT00000380386 ; FAM49B-005; intron 1

  OTTHUMT00000380387 ; FAM49B-008; intron 1

  OTTHUMT00000380388 ; FAM49B-007; intron 1

  OTTHUMT00000380391 ; FAM49B-009; intron 1

  OTTHUMT00000380395 ; FAM49B-012; intron 1

  OTTHUMT00000380396 ; FAM49B-019; intron 1

  OTTHUMT00000380397 ; FAM49B-020; intron 1

  OTTHUMT00000380398 ; FAM49B-016; intron 1

  OTTHUMT00000380399 ; FAM49B-011; intron 1

  OTTHUMT00000380592 ; FAM49B-024; intron 1

  OTTHUMT00000380401 ; FAM49B-015; intron 1

  OTTHUMT00000380403 ; FAM49B-017; intron 1

  OTTHUMT00000380405 ; FAM49B-013; intron 1

  OTTHUMT00000380406 ; FAM49B-014; intron 1

  OTTHUMT00000380385 ; FAM49B-006; intron 1

  OTTHUMT00000380386 ; FAM49B-005; intron 1

  OTTHUMT00000380387 ; FAM49B-008; intron 1

  OTTHUMT00000380388 ; FAM49B-007; intron 1

  OTTHUMT00000380391 ; FAM49B-009; intron 1

  OTTHUMT00000380395 ; FAM49B-012; intron 1

  OTTHUMT00000380396 ; FAM49B-019; intron 1

  OTTHUMT00000380397 ; FAM49B-020; intron 1

  OTTHUMT00000380398 ; FAM49B-016; intron 1

  OTTHUMT00000380399 ; FAM49B-011; intron 1

  OTTHUMT00000380592 ; FAM49B-024; intron 1

  OTTHUMT00000380401 ; FAM49B-015; intron 1

  OTTHUMT00000380403 ; FAM49B-017; intron 1

  OTTHUMT00000380405 ; FAM49B-013; intron 1

  OTTHUMT00000380406 ; FAM49B-014; intron 1

  OTTHUMT00000380385 ; FAM49B-006; intron 1

  OTTHUMT00000380386 ; FAM49B-005; intron 1

  OTTHUMT00000380387 ; FAM49B-008; intron 1

  OTTHUMT00000380388 ; FAM49B-007; intron 1

  OTTHUMT00000380391 ; FAM49B-009; intron 1

  OTTHUMT00000380395 ; FAM49B-012; intron 1

  OTTHUMT00000380396 ; FAM49B-019; intron 1

  OTTHUMT00000380397 ; FAM49B-020; intron 1

  OTTHUMT00000380398 ; FAM49B-016; intron 1

  OTTHUMT00000380399 ; FAM49B-011; intron 1

  OTTHUMT00000380592 ; FAM49B-024; intron 1

  OTTHUMT00000380401 ; FAM49B-015; intron 1

  OTTHUMT00000380403 ; FAM49B-017; intron 1

  OTTHUMT00000380405 ; FAM49B-013; intron 1

  OTTHUMT00000380406 ; FAM49B-014; intron 1

  ENST00000523509 ; FAM49B-006; intron 1

  ENST00000401979 ; FAM49B-005; intron 1

  ENST00000519110 ; FAM49B-008; intron 1

  ENST00000523288 ; FAM49B-007; intron 1

  ENST00000517654 ; FAM49B-009; intron 1

  ENST00000518879 ; FAM49B-012; intron 1

  ENST00000522702 ; FAM49B-019; intron 1

  ENST00000521223 ; FAM49B-020; intron 1

  ENST00000518283 ; FAM49B-016; intron 1

  ENST00000523993 ; FAM49B-011; intron 1

  ENST00000519020 ; FAM49B-024; intron 1

  ENST00000518167 ; FAM49B-015; intron 1

  ENST00000522361 ; FAM49B-017; intron 1

  ENST00000523514 ; FAM49B-013; intron 1

  ENST00000518285 ; FAM49B-014; intron 1

  ENST00000523509 ; FAM49B-006; intron 1

  ENST00000401979 ; FAM49B-005; intron 1

  ENST00000519110 ; FAM49B-008; intron 1

  ENST00000523288 ; FAM49B-007; intron 1

  ENST00000517654 ; FAM49B-009; intron 1

  ENST00000518879 ; FAM49B-012; intron 1

  ENST00000522702 ; FAM49B-019; intron 1

  ENST00000521223 ; FAM49B-020; intron 1

  ENST00000518283 ; FAM49B-016; intron 1

  ENST00000523993 ; FAM49B-011; intron 1

  ENST00000519020 ; FAM49B-024; intron 1

  ENST00000518167 ; FAM49B-015; intron 1

  ENST00000522361 ; FAM49B-017; intron 1

  ENST00000523514 ; FAM49B-013; intron 1

  ENST00000518285 ; FAM49B-014; intron 1

  ENST00000523509 ; FAM49B-006; intron 1

  ENST00000401979 ; FAM49B-005; intron 1

  ENST00000519110 ; FAM49B-008; intron 1

  ENST00000523288 ; FAM49B-007; intron 1

  ENST00000517654 ; FAM49B-009; intron 1

  ENST00000518879 ; FAM49B-012; intron 1

  ENST00000522702 ; FAM49B-019; intron 1

  ENST00000521223 ; FAM49B-020; intron 1

  ENST00000518283 ; FAM49B-016; intron 1

  ENST00000523993 ; FAM49B-011; intron 1

  ENST00000519020 ; FAM49B-024; intron 1

  ENST00000518167 ; FAM49B-015; intron 1

  ENST00000522361 ; FAM49B-017; intron 1

  ENST00000523514 ; FAM49B-013; intron 1

  ENST00000518285 ; FAM49B-014; intron 1

Mature sequence hsa-miR-5194

• Accession: MIMAT0021125
• Sequence: 73 - ugagggguuuggaaugggaugg - 94
• Deep sequencing: 1 reads, 1 experiments
• Evidence: experimental; Solexa [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-5194
  • MIRDB:hsa-miR-5194
  • TARGETMINER:hsa-miR-5194

References

1. PMID:21606961 "Discovery of new microRNAs by small RNAome deep sequencing in childhood acute lymphoblastic leukemia" Schotte D, Moqadam FA, Lange-Turenhout EA, Chen C, van Ijcken WF, Pieters R, den Boer ML Leukemia. 25:1389-1399(2011).