Stem-loop sequence bdi-MIR5173

Accession MI0018142
Description Brachypodium distachyon miR5173 stem-loop
Stem-loop 
----       c          g        u                       a      c ug c  c   ccau       -  gacuag 
    gagaugc uggcuguaua ggccguau cuucucguauaugcggauguacc uaugga c  a uu aag    gguucgg uc      a
    ||||||| |||||||||| |||||||| ||||||||||||||||||||||| |||||| |  | || |||    ||||||| ||       
    cucuaug accgauauau ccggcaua gaagagcauauaugucuacgugg auacuu g  u aa uuc    ccgagcc gg      c
uuag       -          g        -                       c      a gu u  a   --uu       c  acuacg
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Genome context
Coordinates (v1.0) Overlapping transcripts
chr1: 22135899-22136079 [-]
intergenic

Mature sequence bdi-miR5173

Accession MIMAT0020717
Sequence

31 -  

ucucguauaugcggauguacc

 - 51

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Evidence not experimental

References

1
PMID:21371551 "Implementation of a de novo genome-wide computational approach for updating Brachypodium miRNAs" Baev V, Milev I, Naydenov M, Apostolova E, Minkov G, Minkov I, Yahubyan G Genomics. 97:282-293(2011).