Stem-loop sequence osa-MIR5146

Accession MI0018058
Description Oryza sativa miR5146 stem-loop
Stem-loop 
---------               -   -aa       a   cuau 
         uauaggugcugguuc uua   aaaaccg uac    a
         ||||||||||||||| |||   ||||||| |||    g
         auauccacggccaag aau   uuuuggc aug    u
aaaugcuuc               u   caa       c   uuua
Get sequence
Deep sequencing
113 reads, 3 experiments
Genome context
Coordinates (MSU7) Overlapping transcripts
Chr1: 22418294-22418377 [+]
intergenic

Mature sequence osa-miR5146

Accession MIMAT0021091
Sequence

51 -  

uuuaacuaaugaaccggcaccuau

 - 74

Get sequence
Deep sequencing 69 reads, 2 experiments
Evidence experimental; Solexa [1]

References

1
PMID:21525786 "Genome-wide discovery and analysis of microRNAs and other small RNAs from rice embryogenic callus" Chen CJ, liu Q, Zhang YC, Qu LH, Chen YQ, Gautheret D RNA Biol. 8:538-547(2011).