Stem-loop sequence mmu-mir-5101

Accession MI0018009
Description Mus musculus miR-5101 stem-loop
Stem-loop 
-       --ua        --u            ----c    u 
 auuuucu    guaucagu   acaaacaaaaac     guuu g
 |||||||    ||||||||   ||||||||||||     ||||  
 uaagaga    cguagucg   uguuuguuuuug     caga u
g       ccga        uuu            uuguu    a
Get sequence
Deep sequencing
36 reads, 19 experiments
Genome context
Coordinates (GRCm38) Overlapping transcripts
chr12: 75909103-75909185 [+]
sense
OTTMUST00000082377 ; Syne2-001; 3'UTR (exon 16)
ENSMUST00000044217 ; Syne2-201; 3'UTR (exon 16)
ENSMUST00000143031 ; Syne2-001; 3'UTR (exon 16)
Database links

Mature sequence mmu-miR-5101

Accession MIMAT0020608
Sequence

52 -  

uuuguuuguuuugcugaugcag

 - 73

Get sequence
Deep sequencing 36 reads, 19 experiments
Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:21403133 "Ordered progression of stage-specific miRNA profiles in the mouse B2 B-cell lineage" Spierings DC, McGoldrick D, Hamilton-Easton AM, Neale G, Murchison EP, Hannon GJ, Green DR, Withoff S Blood. 117:5340-5349(2011).