Stem-loop sequence mmu-mir-5098

Accession MI0018006
Description Mus musculus miR-5098 stem-loop
Gene family MIPF0001275; mir-1954
Stem-loop 
au       a         u       a      uuuugu 
  uagccag guuacaugg gaagccc guuuug      u
  ||||||| ||||||||| ||||||| ||||||       
  gucgguc cgauguguc cuuuggg cagagu      u
cu       c         u       a      uuuugu
Get sequence
Deep sequencing
234 reads, 41 experiments
Genome context
Coordinates (GRCm38) Overlapping transcripts
chr5: 77272757-77272838 [+]
sense
OTTMUST00000050752 ; Rest-002; intron 2
OTTMUST00000050751 ; Rest-001; intron 2
ENSMUST00000113449 ; Rest-002; intron 2
ENSMUST00000080359 ; Rest-001; intron 2
Database links

Mature sequence mmu-miR-5098

Accession MIMAT0020605
Sequence

11 -  

guuacauggugaagcccaguu

 - 31

Get sequence
Deep sequencing 12 reads, 11 experiments
Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:21403133 "Ordered progression of stage-specific miRNA profiles in the mouse B2 B-cell lineage" Spierings DC, McGoldrick D, Hamilton-Easton AM, Neale G, Murchison EP, Hannon GJ, Green DR, Withoff S Blood. 117:5340-5349(2011).