Stem-loop sequence mmu-mir-5098

AccessionMI0018006 (change log)
Symbol MGI:Mir5098
DescriptionMus musculus miR-5098 stem-loop
Gene family MIPF0001275; mir-1954
Literature search

1 open access papers mention mmu-mir-5098
(1 sentences)

Stem-loop
   au       a         u       a      uuuugu 
5'   uagccag guuacaugg gaagccc guuuug      u
     ||||||| ||||||||| ||||||| ||||||       
3'   gucgguc cgauguguc cuuuggg cagagu      u
   cu       c         u       a      uuuugu 
Get sequence
Deep sequencing
16108 reads, 1.13e+03 reads per million, 136 experiments
Confidence Annotation confidence: undefined
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Genome context
Coordinates (GRCm38; GCA_000001635.2) Overlapping transcripts
chr5: 77272757-77272838 [+]
sense
OTTMUST00000050751 ; Rest-001; intron 2
OTTMUST00000050752 ; Rest-002; intron 2
ENSMUST00000080359 ; Rest-001; intron 2
ENSMUST00000113449 ; Rest-002; intron 2
Database links

Mature sequence mmu-miR-5098

Accession MIMAT0020605
Sequence

11 - 

guuacauggugaagcccaguu

 - 31

Get sequence
Deep sequencing23 reads, 16 experiments
Evidence experimental; Illumina [1]
Database links
Predicted targets

References

1
PMID:21403133 "Ordered progression of stage-specific miRNA profiles in the mouse B2 B-cell lineage" Spierings DC, McGoldrick D, Hamilton-Easton AM, Neale G, Murchison EP, Hannon GJ, Green DR, Withoff S Blood. 117:5340-5349(2011).