Stem-loop sequence hsa-mir-1273f

AccessionMI0018002
Symbol HGNC:MIR1273F
DescriptionHomo sapiens miR-1273f stem-loop
Gene family MIPF0000579; mir-1273
Stem-loop
   aggugg        -   --ga   ug  aga   a  u      ga  -  a 
5'       gaggauug cuu    gcc  gg   ugg gg ugcagu  gc ug g
         |||||||| |||    |||  ||   ||| || ||||||  || ||  
3'       uuccugac gag    cgg  cc   acc cc acguca  cg ac a
   -cucug        u   auac   gu  --g   -  c      -a  c  u 
Get sequence
Deep sequencing
1318 reads, 1.4e+03 reads per million, 65 experiments
Confidence
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Genome context
Coordinates (GRCh38) Overlapping transcripts
chr1: 52928674-52928772 [+]
antisense
OTTHUMT00000022473 ; ZCCHC11-012; intron 15
OTTHUMT00000022466 ; ZCCHC11-005; intron 16
OTTHUMT00000022462 ; ZCCHC11-001; intron 16
OTTHUMT00000387710 ; ZCCHC11-017; intron 16
OTTHUMT00000022463 ; ZCCHC11-002; exon 16
ENST00000528642 ; ZCCHC11-012; intron 15
ENST00000257177 ; ZCCHC11-005; intron 16
ENST00000371544 ; ZCCHC11-001; intron 16
ENST00000484723 ; ZCCHC11-017; intron 16
ENST00000371541 ; ZCCHC11-002; exon 16
Clustered miRNAs
< 10kb from hsa-mir-1273f
hsa-mir-1273fchr1: 52928674-52928772 [+]
hsa-mir-5095chr1: 52934930-52935017 [+]
Database links

Mature sequence hsa-miR-1273f

Accession MIMAT0020601
Sequence

25 - 

ggagauggagguugcagug

 - 43

Get sequence
Deep sequencing66 reads, 24 experiments
Evidence experimental; RTPCR [1]
Predicted targets

References

1
PMID:21377523 "Identification and analysis of novel microRNAs from fragile sites of human cervical cancer: computational and experimental approach" Reshmi G, Chandra SS, Babu VJ, Babu PS, Santhi WS, Ramachandran S, Lakshmi S, Nair AS, Pillai MR Genomics. 97:333-340(2011).