Stem-loop sequence bdi-MIR5057

Accession MI0017947
Description Brachypodium distachyon miR5057 stem-loop
Stem-loop 
uggc    ---cca      c       ---     ca   u 
    acag      aaauuu aaaucau   uuuga  aag u
    ||||      |||||| |||||||   |||||  |||  
    uguc      uuuaaa uuuggua   aaacu  uuc a
---a    aaaaag      -       cuu     cg   a
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Comments

This is a predicted homolog of a miRNA identified by Illumina deep sequencing in barley (Hordeum vulgare) [1].

Genome context
Coordinates (v1.0) Overlapping transcripts
chr4: 10594352-10594427 [+]
intergenic

Mature sequence bdi-miR5057

Accession MIMAT0020556
Sequence

12 -  

aaauuucaaaucauuuugaca

 - 32

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Evidence not experimental

References

1
PMID:21352554 "Discovery of barley miRNAs through deep sequencing of short reads" Schreiber AW, Shi BJ, Huang CY, Langridge P, Baumann U BMC Genomics. 12:129(2011).