Stem-loop sequence hsa-mir-5047

Accession MI0017932
Description Homo sapiens miR-5047 stem-loop
Stem-loop 
gaa  ---g      u    ---ga   -a   -    ua      -   uuug g 
   gc    cuugcc agac     gac  cag ugca  aaaaca acu    g g
   ||    |||||| ||||     |||  ||| ||||  |||||| |||    |  
   cg    gaacgg ucug     uug  guc acgu  uuuugu ugg    c g
--a  aaca      u    gaaug   gc   g    uc      a   ---a a
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Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr17: 62497332-62497431 [-]
sense
OTTHUMT00000445044 ; DDX5-031; intron 1
OTTHUMT00000445045 ; DDX5-030; intron 2
OTTHUMT00000445077 ; DDX5-032; intron 2
OTTHUMT00000444973 ; DDX5-023; intron 4
OTTHUMT00000444027 ; DDX5-003; intron 10
OTTHUMT00000444028 ; DDX5-004; intron 10
OTTHUMT00000444031 ; DDX5-006; intron 10
OTTHUMT00000444029 ; DDX5-002; exon 11
OTTHUMT00000444030 ; DDX5-001; intron 11
OTTHUMT00000444032 ; DDX5-005; intron 11
ENST00000580026 ; DDX5-031; intron 1
ENST00000578758 ; DDX5-030; intron 2
ENST00000581237 ; DDX5-032; intron 2
ENST00000578491 ; DDX5-023; intron 4
ENST00000450599 ; DDX5-202; intron 10
ENST00000450599 ; DDX5-202; intron 10
ENST00000540698 ; DDX5-003; intron 10
ENST00000581693 ; DDX5-004; intron 10
ENST00000450599 ; DDX5-006; intron 10
ENST00000540698 ; DDX5-203; intron 11
ENST00000540698 ; DDX5-203; intron 11
ENST00000581230 ; DDX5-002; exon 11
ENST00000225792 ; DDX5-001; intron 11
ENST00000578804 ; DDX5-005; intron 11
ENST00000225792 ; DDX5-201; intron 12
ENST00000225792 ; DDX5-201; intron 12
Clustered miRNAs
< 10kb from hsa-mir-5047
hsa-mir-5047 chr17: 62497332-62497431 [-]
hsa-mir-3064 chr17: 62496892-62496957 [-]
Database links

Mature sequence hsa-miR-5047

Accession MIMAT0020541
Sequence

64 -  

uugcagcugcgguuguaaggu

 - 84

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Evidence experimental; Northern [1], RTPCR [1]
Predicted targets

References

1
PMID:21346006 "An evolutionarily conserved, alternatively spliced, intron in the p68/DDX5 DEAD-box RNA helicase gene encodes a novel miRNA" Moore HC, Johnston M, Nicol SM, Bourdon JC, Thompson AM, Hutvagner G, Fuller-Pace FV RNA. 17:555-562(2011).