Stem-loop sequence gma-MIR1516b

Accession

MI0017911 (change log)

Description

Glycine max miR1516b stem-loop

Gene family

MIPF0001353; MIR1516

Literature search

1 open access papers mention gma-MIR1516b
(1 sentences)

Stem-loop

   gauuuguuuugaguauuugggugggguggaauauaacuauauaaguca    u    c g             -      uau 
5'                                                 uaag gcuu u agagcuucucuac agaaaa   a
                                                   |||| |||| | ||||||||||||| ||||||   c
3'                                                 auuc cgaa a uuuugaagagaug uuuuuu   a
   -----------------cgcgacaaaccuauguuuccaucuuacgaaa    u    a g             g      uca 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Glycine_max_v2.0; GCA_000004515.3): chr9: 2548521-2548671 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0017911

Mature sequence gma-miR1516b

• Accession: MIMAT0021061
• Sequence: 63 - agcuucucuacagaaaauaua - 83
• Evidence: experimental; SOLiD [1]

References

1. PMID:21751852 "Transcriptional analysis of soybean root response to Fusarium virguliforme, the causal agent of sudden death syndrome" Radwan O, Liu Y, Clough SJ Mol Plant Microbe Interact. 24:958-972(2011).