Stem-loop sequence ath-MIR5019

Accession MI0017887
Description Arabidopsis thaliana miR5019 stem-loop
Stem-loop 
           c   -gac     g                     accacguuuuccucuuucguuuaa 
uucugauguaa agc    aguuu ucuuuuccaacaacugauaga                        g
||||||||||| |||    ||||| |||||||||||||||||||||                        a
aggacuacauu uug    ucaaa agaaaggguuguugacuaucu                        g
           -   auuc     a                     cgacguuauagaagugcuaauuuu
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Deep sequencing
2 reads, 1 experiments
Genome context
Coordinates (TAIR10) Overlapping transcripts
chr2: 10403230-10403370 [+]
intergenic

Mature sequence ath-miR5019

Accession MIMAT0020523
Sequence

106 -  

uguugggaaagaaaaacucuu

 - 126

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Evidence experimental; Solexa [1]

References

1
PMID:21357774 "MicroRNA activity in the Arabidopsis male germline" Borges F, Pereira PA, Slotkin RK, Martienssen RA, Becker JD J Exp Bot. 62:1611-1620(2011).