Stem-loop sequence hsa-mir-5002

Accession

MI0017868

Description

Homo sapiens miR-5002 stem-loop

Stem-loop

-ucuuc     ugucc       uu     uc       c     ag   a 
      cucuc     ucuggaa  ugguu  ugaggca uuagu  gug u
      |||||     |||||||  |||||  ||||||| |||||  |||  
      gggag     agaccuu  accag  acuccgu aguca  uac a
cucauu     ----u       -c     uc       c     -g   g 

Genome context

• Coordinates (GRCh37.p5): chr3: 123851776-123851872 [+]
• Overlapping transcripts:

  sense

  OTTHUMT00000355270 ; KALRN-012; intron 1

  OTTHUMT00000356282 ; KALRN-013; intron 1

  OTTHUMT00000258843 ; KALRN-005; intron 1

  OTTHUMT00000355270 ; KALRN-012; intron 1

  OTTHUMT00000356282 ; KALRN-013; intron 1

  OTTHUMT00000258843 ; KALRN-005; intron 1

  OTTHUMT00000355270 ; KALRN-012; intron 1

  OTTHUMT00000356282 ; KALRN-013; intron 1

  OTTHUMT00000258843 ; KALRN-005; intron 1

  OTTHUMT00000259130 ; KALRN-010; intron 2

  OTTHUMT00000259130 ; KALRN-010; intron 2

  OTTHUMT00000259130 ; KALRN-010; intron 2

  OTTHUMT00000259127 ; KALRN-007; intron 3

  OTTHUMT00000259127 ; KALRN-007; intron 3

  OTTHUMT00000259127 ; KALRN-007; intron 3

  OTTHUMT00000259126 ; KALRN-006; intron 6

  OTTHUMT00000259126 ; KALRN-006; intron 6

  OTTHUMT00000259126 ; KALRN-006; intron 6

  ENST00000360013 ; KALRN-201; intron 1

  ENST00000460856 ; KALRN-013; intron 1

  ENST00000240874 ; KALRN-005; intron 1

  ENST00000488825 ; KALRN-012; intron 1

  ENST00000488825 ; KALRN-012; intron 1

  ENST00000460856 ; KALRN-013; intron 1

  ENST00000240874 ; KALRN-005; intron 1

  ENST00000360013 ; KALRN-201; intron 1

  ENST00000488825 ; KALRN-012; intron 1

  ENST00000460856 ; KALRN-013; intron 1

  ENST00000240874 ; KALRN-005; intron 1

  ENST00000360013 ; KALRN-201; intron 1

  ENST00000448253 ; KALRN-010; intron 2

  ENST00000448253 ; KALRN-010; intron 2

  ENST00000448253 ; KALRN-010; intron 2

  ENST00000483658 ; KALRN-007; intron 3

  ENST00000483658 ; KALRN-007; intron 3

  ENST00000483658 ; KALRN-007; intron 3

  ENST00000477496 ; KALRN-006; intron 6

  ENST00000477496 ; KALRN-006; intron 6

  ENST00000477496 ; KALRN-006; intron 6

Mature sequence hsa-miR-5002-5p

• Accession: MIMAT0021023
• Sequence: 21 - aauuugguuucugaggcacuuagu - 44
• Evidence: not experimental
• Predicted targets:
  • DIANA-MICROT:hsa-miR-5002-5p
  • MIRDB:hsa-miR-5002-5p
  • TARGETMINER:hsa-miR-5002-5p

Mature sequence hsa-miR-5002-3p

• Accession: MIMAT0021024
• Sequence: 60 - ugacugccucacugaccacuu - 80
• Evidence: not experimental
• Predicted targets:
  • DIANA-MICROT:hsa-miR-5002-3p
  • MIRDB:hsa-miR-5002-3p
  • TARGETMINER:hsa-miR-5002-3p

References

1. PMID:21558790 "Enhancing miRNA annotation confidence in miRBase by continuous cross dataset analysis" Hansen TB, Kjems J, Bramsen JB RNA Biol. 8:378-383(2011).