Stem-loop sequence cel-mir-4922-1

Accession

MI0017707 (change log)

Description

Caenorhabditis elegans miR-4922-1 stem-loop

Gene family

MIPF0001229; mir-4922

Stem-loop

   --            auuucauauugaaaaaag 
5'   gugaguagaaca                  u
     ||||||||||||                  a
3'   cacuuaucuugu                  a
   ga            caauauaucuccuguuaa 

Deep sequencing

64 reads, 0 reads per million, 10 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (WBcel235; GCA_000002985.3): chrV: 3380145-3380209 [-]
• Overlapping transcripts:

  sense

  C04E12.10 ; C04E12.10; intron 11

Database links

• miRBase Tracker:MI0017707

Mature sequence cel-miR-4922

• Accession: MIMAT0020128
• Sequence: 44 - uauauaacuguucuauucacag - 65
• Deep sequencing: 98 reads, 8 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:21177960 "Computational and experimental identification of mirtrons in Drosophila melanogaster and Caenorhabditis elegans" Chung WJ, Agius P, Westholm JO, Chen M, Okamura K, Robine N, Leslie CS, Lai EC Genome Res. 21:286-300(2011).