Stem-loop sequence hsa-mir-4749

Accession

MI0017388

Description

Homo sapiens miR-4749 stem-loop

Stem-loop

c   c    a    cca    a  uag    u 
 cug gggg cagg   gggc uc   gcug g
 ||| |||| ||||   |||| ||   ||||  
 gac cccc gucc   cccg ag   ugac c
-   a    c    -uc    c  ---    a 

Deep sequencing

2 reads, 2 experiments

Genome context

• Coordinates (GRCh37.p5): chr19: 50357848-50357908 [+]
• Overlapping transcripts:

  sense

  ENST00000221557 ; PTOV1-201; intron 2

  ENST00000391842 ; PTOV1-202; intron 2

  ENST00000221557 ; PTOV1-201; intron 2

  ENST00000391842 ; PTOV1-202; intron 2

  ENST00000221557 ; PTOV1-201; intron 2

  ENST00000391842 ; PTOV1-202; intron 2

Database links

• ENTREZGENE: 100616313;MIR4749

Mature sequence hsa-miR-4749-5p

• Accession: MIMAT0019885
• Sequence: 3 - ugcggggacaggccagggcauc - 24
• Deep sequencing: 1 reads, 1 experiments
• Evidence: experimental; Solexa [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-4749-5p
  • MIRDB:hsa-miR-4749-5p
  • TARGETMINER:hsa-miR-4749-5p

Mature sequence hsa-miR-4749-3p

• Accession: MIMAT0019886
• Sequence: 42 - cgccccuccugcccccacag - 61
• Deep sequencing: 1 reads, 1 experiments
• Evidence: experimental; Solexa [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-4749-3p
  • MIRDB:hsa-miR-4749-3p
  • TARGETMINER:hsa-miR-4749-3p

References

1. PMID:21199797 "Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene" Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C Cancer Res. 71:78-86(2011).