Stem-loop sequence hsa-mir-4747

Accession

MI0017386

Description

Homo sapiens miR-4747 stem-loop

Stem-loop

-a    a          -      - a 
  ggga ggaggcuugg ucuuag c c
  |||| |||||||||| |||||| | g
  cccu cuuucgggcc ggaauc g g
ga    c          c      u g 

Deep sequencing

3 reads, 2 experiments

Genome context

• Coordinates (GRCh37.p5): chr19: 4932699-4932752 [+]
• Overlapping transcripts:

  sense

  ENST00000396708 ; UHRF1-202; intron 1

  ENST00000396708 ; UHRF1-202; intron 1

  ENST00000396708 ; UHRF1-202; intron 1

  ENST00000398240 ; UHRF1-203; intron 3

  ENST00000398240 ; UHRF1-203; intron 3

  ENST00000398240 ; UHRF1-203; intron 3

  ENST00000262952 ; UHRF1-201; intron 4

  ENST00000455180 ; UHRF1-204; intron 4

  ENST00000543616 ; UHRF1-205; intron 4

  ENST00000262952 ; UHRF1-201; intron 4

  ENST00000455180 ; UHRF1-204; intron 4

  ENST00000543616 ; UHRF1-205; intron 4

  ENST00000262952 ; UHRF1-201; intron 4

  ENST00000455180 ; UHRF1-204; intron 4

  ENST00000543616 ; UHRF1-205; intron 4

Database links

• ENTREZGENE: 100616337;MIR4747

Mature sequence hsa-miR-4747-5p

• Accession: MIMAT0019882
• Sequence: 1 - agggaaggaggcuuggucuuag - 22
• Deep sequencing: 3 reads, 2 experiments
• Evidence: experimental; Solexa [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-4747-5p
  • MIRDB:hsa-miR-4747-5p
  • TARGETMINER:hsa-miR-4747-5p

Mature sequence hsa-miR-4747-3p

• Accession: MIMAT0019883
• Sequence: 33 - aaggcccgggcuuuccucccag - 54
• Evidence: experimental; Solexa [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-4747-3p
  • MIRDB:hsa-miR-4747-3p
  • TARGETMINER:hsa-miR-4747-3p

References

1. PMID:21199797 "Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene" Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C Cancer Res. 71:78-86(2011).