Stem-loop sequence hsa-mir-4727

Accession

MI0017364

Description

Homo sapiens miR-4727 stem-loop

Stem-loop

-               -  a    cag 
 aaucugccagcuucc ac gugg   a
 ||||||||||||||| || ||||   u
 uuagacggucgaagg ug uacc   u
c               g  a    cuu 

Deep sequencing

12 reads, 4 experiments

Genome context

• Coordinates (GRCh37.p5): chr17: 36982091-36982145 [+]
• Overlapping transcripts:

  intergenic

Database links

• ENTREZGENE: 100616416;MIR4727

Mature sequence hsa-miR-4727-5p

• Accession: MIMAT0019847
• Sequence: 2 - aucugccagcuuccacagugg - 22
• Evidence: experimental; Solexa [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-4727-5p
  • MIRDB:hsa-miR-4727-5p
  • TARGETMINER:hsa-miR-4727-5p

Mature sequence hsa-miR-4727-3p

• Accession: MIMAT0019848
• Sequence: 34 - auagugggaagcuggcagauuc - 55
• Deep sequencing: 12 reads, 4 experiments
• Evidence: experimental; Solexa [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-4727-3p
  • MIRDB:hsa-miR-4727-3p
  • TARGETMINER:hsa-miR-4727-3p

References

1. PMID:21199797 "Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene" Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C Cancer Res. 71:78-86(2011).