Stem-loop sequence hsa-mir-4713

Accession

MI0017347

Description

Homo sapiens miR-4713 stem-loop

Stem-loop

                    ac a  c      aag 
guccccauuuuucucccacu  c gg ucccau   g
||||||||||||||||||||  | || ||||||   g
cagggguaaaaagaggguga  g cc agggua   u
                    ca a  u      agc 

Deep sequencing

1 reads, 1 experiments

Genome context

• Coordinates (GRCh37.p5): chr15: 51534387-51534461 [+]
• Overlapping transcripts:

  sense

  OTTHUMT00000418684 ; RP11-108K3.1-001; intron 1

  OTTHUMT00000418684 ; RP11-108K3.1-001; intron 1

  ENST00000559909 ; RP11-108K3.1-001; intron 1

  ENST00000559909 ; RP11-108K3.1-001; intron 1

  antisense

  OTTHUMT00000319756 ; CYP19A1-004; intron 1

  OTTHUMT00000418741 ; CYP19A1-014; intron 1

  OTTHUMT00000319756 ; CYP19A1-004; intron 1

  OTTHUMT00000418741 ; CYP19A1-014; intron 1

  OTTHUMT00000319756 ; CYP19A1-004; intron 1

  OTTHUMT00000254669 ; CYP19A1-001; intron 2

  OTTHUMT00000254669 ; CYP19A1-001; intron 2

  OTTHUMT00000418686 ; CYP19A1-009; intron 2

  OTTHUMT00000418745 ; CYP19A1-017; intron 2

  OTTHUMT00000418746 ; CYP19A1-015; intron 2

  OTTHUMT00000418747 ; CYP19A1-016; intron 2

  OTTHUMT00000418749 ; CYP19A1-012; intron 2

  OTTHUMT00000254669 ; CYP19A1-001; intron 2

  OTTHUMT00000418686 ; CYP19A1-009; intron 2

  OTTHUMT00000418745 ; CYP19A1-017; intron 2

  OTTHUMT00000418746 ; CYP19A1-015; intron 2

  OTTHUMT00000418747 ; CYP19A1-016; intron 2

  OTTHUMT00000418749 ; CYP19A1-012; intron 2

  OTTHUMT00000319759 ; CYP19A1-007; intron 3

  OTTHUMT00000319760 ; CYP19A1-008; intron 3

  OTTHUMT00000319759 ; CYP19A1-007; intron 3

  OTTHUMT00000418743 ; CYP19A1-011; intron 3

  OTTHUMT00000319760 ; CYP19A1-008; intron 3

  OTTHUMT00000418748 ; CYP19A1-013; intron 3

  OTTHUMT00000319759 ; CYP19A1-007; intron 3

  OTTHUMT00000418743 ; CYP19A1-011; intron 3

  OTTHUMT00000319760 ; CYP19A1-008; intron 3

  OTTHUMT00000418748 ; CYP19A1-013; intron 3

  OTTHUMT00000319754 ; CYP19A1-002; intron 4

  OTTHUMT00000319754 ; CYP19A1-002; intron 4

  OTTHUMT00000319754 ; CYP19A1-002; intron 4

  ENST00000405913 ; CYP19A1-004; intron 1

  ENST00000396404 ; CYP19A1-202; intron 1

  ENST00000420301 ; CYP19A1-203; intron 1

  ENST00000559878 ; CYP19A1-014; intron 1

  ENST00000405913 ; CYP19A1-004; intron 1

  ENST00000420301 ; CYP19A1-202; intron 1

  ENST00000559878 ; CYP19A1-014; intron 1

  ENST00000405913 ; CYP19A1-004; intron 1

  ENST00000396402 ; CYP19A1-001; intron 2

  ENST00000260433 ; CYP19A1-201; intron 2

  ENST00000396402 ; CYP19A1-001; intron 2

  ENST00000557934 ; CYP19A1-009; intron 2

  ENST00000561075 ; CYP19A1-017; intron 2

  ENST00000558328 ; CYP19A1-015; intron 2

  ENST00000557858 ; CYP19A1-016; intron 2

  ENST00000559646 ; CYP19A1-012; intron 2

  ENST00000260433 ; CYP19A1-201; intron 2

  ENST00000396402 ; CYP19A1-001; intron 2

  ENST00000557934 ; CYP19A1-009; intron 2

  ENST00000561075 ; CYP19A1-017; intron 2

  ENST00000558328 ; CYP19A1-015; intron 2

  ENST00000557858 ; CYP19A1-016; intron 2

  ENST00000559646 ; CYP19A1-012; intron 2

  ENST00000260433 ; CYP19A1-201; intron 2

  ENST00000453807 ; CYP19A1-008; intron 3

  ENST00000405011 ; CYP19A1-007; intron 3

  ENST00000541721 ; CYP19A1-204; intron 3

  ENST00000396404 ; CYP19A1-007; intron 3

  ENST00000439712 ; CYP19A1-011; intron 3

  ENST00000453807 ; CYP19A1-008; intron 3

  ENST00000405011 ; CYP19A1-013; intron 3

  ENST00000541721 ; CYP19A1-203; intron 3

  ENST00000396404 ; CYP19A1-007; intron 3

  ENST00000439712 ; CYP19A1-011; intron 3

  ENST00000453807 ; CYP19A1-008; intron 3

  ENST00000405011 ; CYP19A1-013; intron 3

  ENST00000439712 ; CYP19A1-002; intron 4

  ENST00000559980 ; CYP19A1-002; intron 4

  ENST00000559980 ; CYP19A1-002; intron 4

Database links

• ENTREZGENE: 100616369;MIR4713

Mature sequence hsa-miR-4713-5p

• Accession: MIMAT0019820
• Sequence: 11 - uucucccacuaccaggcuccca - 32
• Evidence: experimental; Solexa [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-4713-5p
  • MIRDB:hsa-miR-4713-5p
  • TARGETMINER:hsa-miR-4713-5p

Mature sequence hsa-miR-4713-3p

• Accession: MIMAT0019821
• Sequence: 44 - ugggauccagacagugggagaa - 65
• Evidence: experimental; Solexa [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-4713-3p
  • MIRDB:hsa-miR-4713-3p
  • TARGETMINER:hsa-miR-4713-3p

References

1. PMID:21199797 "Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene" Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C Cancer Res. 71:78-86(2011).
2. PMID:21558790 "Enhancing miRNA annotation confidence in miRBase by continuous cross dataset analysis" Hansen TB, Kjems J, Bramsen JB RNA Biol. 8:378-383(2011).