Stem-loop sequence hsa-mir-4707

Accession

MI0017340

Description

Homo sapiens miR-4707 stem-loop

Stem-loop

   u   -     c    gc         -- ug -    u 
ggu ccg gagcc cggc  gggcggguu  c  g ggug a
||| ||| ||||| ||||  |||||||||  |  | ||||  
cca ggc cuugg gccg  cccgcccga  g  c ucgc g
   c   u     a    ac         cc gu g    a 

Deep sequencing

18 reads, 7 experiments

Genome context

• Coordinates (GRCh37.p5): chr14: 23426159-23426238 [-]
• Overlapping transcripts:

  sense

  OTTHUMT00000071684 ; HAUS4-001; 5'UTR (exon 1)

  OTTHUMT00000071680 ; HAUS4-003; 5'UTR (exon 1)

  OTTHUMT00000413449 ; HAUS4-005; 5'UTR (exon 1)

  OTTHUMT00000071682 ; HAUS4-004; 5'UTR (exon 1)

  OTTHUMT00000071683 ; HAUS4-002; 5'UTR (exon 1)

  OTTHUMT00000413450 ; HAUS4-006; 5'UTR (exon 1)

  OTTHUMT00000413501 ; HAUS4-021; 5'UTR (exon 1)

  OTTHUMT00000413465 ; HAUS4-014; 5'UTR (exon 1)

  OTTHUMT00000413466 ; HAUS4-017; exon 1

  OTTHUMT00000413502 ; HAUS4-019; exon 1

  OTTHUMT00000413468 ; HAUS4-016; exon 1

  OTTHUMT00000413503 ; HAUS4-020; 5'UTR (exon 1)

  OTTHUMT00000413471 ; HAUS4-011; 5'UTR (exon 1)

  OTTHUMT00000413504 ; RP11-298I3.5-001; intron 1

  OTTHUMT00000071684 ; HAUS4-001; 5'UTR (exon 1)

  OTTHUMT00000071680 ; HAUS4-003; 5'UTR (exon 1)

  OTTHUMT00000413449 ; HAUS4-005; 5'UTR (exon 1)

  OTTHUMT00000071682 ; HAUS4-004; 5'UTR (exon 1)

  OTTHUMT00000071683 ; HAUS4-002; 5'UTR (exon 1)

  OTTHUMT00000413450 ; HAUS4-006; 5'UTR (exon 1)

  OTTHUMT00000413501 ; HAUS4-021; 5'UTR (exon 1)

  OTTHUMT00000413465 ; HAUS4-014; 5'UTR (exon 1)

  OTTHUMT00000413466 ; HAUS4-017; exon 1

  OTTHUMT00000413502 ; HAUS4-019; exon 1

  OTTHUMT00000413468 ; HAUS4-016; exon 1

  OTTHUMT00000413503 ; HAUS4-020; 5'UTR (exon 1)

  OTTHUMT00000413471 ; HAUS4-011; 5'UTR (exon 1)

  OTTHUMT00000413504 ; RP11-298I3.5-001; intron 1

  OTTHUMT00000071684 ; HAUS4-001; 5'UTR (exon 1)

  OTTHUMT00000071680 ; HAUS4-003; 5'UTR (exon 1)

  OTTHUMT00000413449 ; HAUS4-005; 5'UTR (exon 1)

  OTTHUMT00000071682 ; HAUS4-004; 5'UTR (exon 1)

  OTTHUMT00000071683 ; HAUS4-002; 5'UTR (exon 1)

  OTTHUMT00000413450 ; HAUS4-006; 5'UTR (exon 1)

  OTTHUMT00000413501 ; HAUS4-021; 5'UTR (exon 1)

  OTTHUMT00000413465 ; HAUS4-014; 5'UTR (exon 1)

  OTTHUMT00000413466 ; HAUS4-017; exon 1

  OTTHUMT00000413502 ; HAUS4-019; exon 1

  OTTHUMT00000413468 ; HAUS4-016; exon 1

  OTTHUMT00000413503 ; HAUS4-020; 5'UTR (exon 1)

  OTTHUMT00000413471 ; HAUS4-011; 5'UTR (exon 1)

  OTTHUMT00000413504 ; RP11-298I3.5-001; intron 1

  OTTHUMT00000413469 ; HAUS4-012; 5'UTR (exon 2)

  OTTHUMT00000413469 ; HAUS4-012; 5'UTR (exon 2)

  ENST00000206474 ; HAUS4-003; 5'UTR (exon 1)

  ENST00000342454 ; HAUS4-005; 5'UTR (exon 1)

  ENST00000347758 ; HAUS4-004; 5'UTR (exon 1)

  ENST00000555367 ; HAUS4-002; 5'UTR (exon 1)

  ENST00000555986 ; HAUS4-006; 5'UTR (exon 1)

  ENST00000555040 ; HAUS4-021; 5'UTR (exon 1)

  ENST00000556915 ; HAUS4-014; 5'UTR (exon 1)

  ENST00000554349 ; HAUS4-017; exon 1

  ENST00000553794 ; HAUS4-019; exon 1

  ENST00000554651 ; HAUS4-016; exon 1

  ENST00000554516 ; HAUS4-020; 5'UTR (exon 1)

  ENST00000554406 ; HAUS4-011; 5'UTR (exon 1)

  ENST00000541587 ; HAUS4-202; 5'UTR (exon 1)

  ENST00000397409 ; HAUS4-201; 5'UTR (exon 1)

  ENST00000490506 ; HAUS4-001; 5'UTR (exon 1)

  ENST00000555074 ; RP11-298I3.5-001; intron 1

  ENST00000490506 ; HAUS4-001; 5'UTR (exon 1)

  ENST00000206474 ; HAUS4-003; 5'UTR (exon 1)

  ENST00000342454 ; HAUS4-005; 5'UTR (exon 1)

  ENST00000347758 ; HAUS4-004; 5'UTR (exon 1)

  ENST00000555367 ; HAUS4-002; 5'UTR (exon 1)

  ENST00000555986 ; HAUS4-006; 5'UTR (exon 1)

  ENST00000555040 ; HAUS4-021; 5'UTR (exon 1)

  ENST00000556915 ; HAUS4-014; 5'UTR (exon 1)

  ENST00000554349 ; HAUS4-017; exon 1

  ENST00000553794 ; HAUS4-019; exon 1

  ENST00000554651 ; HAUS4-016; exon 1

  ENST00000554516 ; HAUS4-020; 5'UTR (exon 1)

  ENST00000554406 ; HAUS4-011; 5'UTR (exon 1)

  ENST00000541587 ; HAUS4-202; 5'UTR (exon 1)

  ENST00000397409 ; HAUS4-201; 5'UTR (exon 1)

  ENST00000555074 ; RP11-298I3.5-001; intron 1

  ENST00000490506 ; HAUS4-001; 5'UTR (exon 1)

  ENST00000206474 ; HAUS4-003; 5'UTR (exon 1)

  ENST00000342454 ; HAUS4-005; 5'UTR (exon 1)

  ENST00000347758 ; HAUS4-004; 5'UTR (exon 1)

  ENST00000555367 ; HAUS4-002; 5'UTR (exon 1)

  ENST00000555986 ; HAUS4-006; 5'UTR (exon 1)

  ENST00000555040 ; HAUS4-021; 5'UTR (exon 1)

  ENST00000556915 ; HAUS4-014; 5'UTR (exon 1)

  ENST00000554349 ; HAUS4-017; exon 1

  ENST00000553794 ; HAUS4-019; exon 1

  ENST00000554651 ; HAUS4-016; exon 1

  ENST00000554516 ; HAUS4-020; 5'UTR (exon 1)

  ENST00000554406 ; HAUS4-011; 5'UTR (exon 1)

  ENST00000541587 ; HAUS4-202; 5'UTR (exon 1)

  ENST00000397409 ; HAUS4-201; 5'UTR (exon 1)

  ENST00000555074 ; RP11-298I3.5-001; intron 1

  ENST00000557591 ; HAUS4-012; 5'UTR (exon 2)

  ENST00000557591 ; HAUS4-012; 5'UTR (exon 2)

Database links

• ENTREZGENE: 100616424;MIR4707

Mature sequence hsa-miR-4707-5p

• Accession: MIMAT0019807
• Sequence: 10 - gccccggcgcgggcggguucugg - 32
• Deep sequencing: 6 reads, 3 experiments
• Evidence: experimental; Solexa [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-4707-5p
  • MIRDB:hsa-miR-4707-5p
  • TARGETMINER:hsa-miR-4707-5p

Mature sequence hsa-miR-4707-3p

• Accession: MIMAT0019808
• Sequence: 52 - agcccgccccagccgagguucu - 73
• Deep sequencing: 12 reads, 5 experiments
• Evidence: experimental; Solexa [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-4707-3p
  • MIRDB:hsa-miR-4707-3p
  • TARGETMINER:hsa-miR-4707-3p

References

1. PMID:21199797 "Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene" Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C Cancer Res. 71:78-86(2011).