Stem-loop sequence hsa-mir-4680

Accession MI0017312
Description Homo sapiens miR-4680 stem-loop
Stem-loop 
--ua   g            c        u   a 
    uaa aacucuugcagu uuagaugu aua a
    ||| |||||||||||| |||||||| |||  
    auu uugagaauguua agucuaua uau a
cacg   g            -        -   a
Get sequence
Deep sequencing
5 reads, 1 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr10: 112657848-112657913 [+]
sense
OTTHUMT00000050370 ; PDCD4-010; exon 4
OTTHUMT00000050370 ; PDCD4-010; exon 4
OTTHUMT00000050370 ; PDCD4-010; exon 4
OTTHUMT00000050366 ; PDCD4-006; exon 7
OTTHUMT00000050366 ; PDCD4-006; exon 7
OTTHUMT00000050361 ; PDCD4-001; exon 12
OTTHUMT00000050361 ; PDCD4-001; exon 12
OTTHUMT00000050361 ; PDCD4-001; exon 12
ENST00000498367 ; PDCD4-010; exon 4
ENST00000498367 ; PDCD4-010; exon 4
ENST00000498367 ; PDCD4-010; exon 4
ENST00000462577 ; PDCD4-006; exon 7
ENST00000462577 ; PDCD4-006; exon 7
ENST00000280154 ; PDCD4-001; exon 12
ENST00000280154 ; PDCD4-001; exon 12
ENST00000280154 ; PDCD4-001; exon 12
ENST00000393104 ; PDCD4-201; exon 13
ENST00000393104 ; PDCD4-201; exon 13
ENST00000393104 ; PDCD4-201; exon 13
Database links

Mature sequence hsa-miR-4680-5p

Accession MIMAT0019764
Sequence

5 -  

agaacucuugcagucuuagaugu

 - 27

Get sequence
Deep sequencing 5 reads, 1 experiments
Evidence experimental; Solexa [1]
Predicted targets

Mature sequence hsa-miR-4680-3p

Accession MIMAT0019765
Sequence

42 -  

ucugaauuguaagaguuguua

 - 62

Get sequence
Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:21199797 "Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene" Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C Cancer Res. 71:78-86(2011).