Stem-loop sequence hsa-mir-2964a

Accession MI0017299
Description Homo sapiens miR-2964a stem-loop
Gene family MIPF0000960; mir-2964
Stem-loop 
  a   ca     a   -      c a       ------------   u 
gg gcu  gccac gau guccag c caauucu            cgg u
|| |||  ||||| ||| |||||| | |||||||            |||  
cc cga  cggug cua cagguu g guuaaga            gcc g
  -   ag     a   a      u c       acaugcucagac   g
Get sequence
Deep sequencing
55 reads, 9 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr9: 131154900-131154987 [+]
antisense
ENST00000385220 ; MIR219-2-201; exon 1
ENST00000385220 ; MIR219-2-201; exon 1
ENST00000385220 ; MIR219-2-201; exon 1
Clustered miRNAs
< 10kb from hsa-mir-2964a
hsa-mir-219-2 chr9: 131154897-131154993 [-]
hsa-mir-2964a chr9: 131154900-131154987 [+]
Database links

Mature sequence hsa-miR-2964a-5p

Accession MIMAT0019747
Sequence

14 -  

agauguccagccacaauucucg

 - 35

Get sequence
Deep sequencing 20 reads, 8 experiments
Evidence experimental; Solexa [1]
Predicted targets

Mature sequence hsa-miR-2964a-3p

Accession MIMAT0019748
Sequence

56 -  

agaauugcguuuggacaaucagu

 - 78

Get sequence
Deep sequencing 35 reads, 7 experiments
Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:21199797 "Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene" Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C Cancer Res. 71:78-86(2011).
2
PMID:21911355 "miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades" Friedlander MR, Mackowiak SD, Li N, Chen W, Rajewsky N Nucleic Acids Res. 40:37-52(2012).