Stem-loop sequence hsa-mir-4645

Accession

MI0017272

Description

Homo sapiens miR-4645 stem-loop

Stem-loop

u                     a         c  aa 
 gauagggaaaccaggcaagaa uauugucuc uc  g
 ||||||||||||||||||||| ||||||||| ||  u
 cuaucucuuugguccguucuu augacagag ag  u
a                     g         c  cg 

Deep sequencing

4 reads, 3 experiments

Genome context

• Coordinates (GRCh37.p5): chr6: 2854265-2854341 [-]
• Overlapping transcripts:

  intergenic

Database links

• ENTREZGENE: 100616285;MIR4645

Mature sequence hsa-miR-4645-5p

• Accession: MIMAT0019705
• Sequence: 11 - accaggcaagaaauauugu - 29
• Deep sequencing: 2 reads, 2 experiments
• Evidence: experimental; Solexa [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-4645-5p
  • MIRDB:hsa-miR-4645-5p
  • TARGETMINER:hsa-miR-4645-5p

Mature sequence hsa-miR-4645-3p

• Accession: MIMAT0019706
• Sequence: 47 - agacaguaguucuugccugguu - 68
• Deep sequencing: 2 reads, 1 experiments
• Evidence: experimental; Solexa [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-4645-3p
  • MIRDB:hsa-miR-4645-3p
  • TARGETMINER:hsa-miR-4645-3p

References

1. PMID:21199797 "Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene" Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C Cancer Res. 71:78-86(2011).