Stem-loop sequence hsa-mir-4642

Accession MI0017269
Description Homo sapiens miR-4642 stem-loop
Stem-loop 
         a          cc   -      --     cua 
cacaacugc uggcaucguc  cug guggcu  guggc   g
||||||||| ||||||||||  ||| ||||||  |||||   g
guguugacg accguaguag  gac caccga  caccg   g
         -          -u   u      aa     aac
Get sequence
Deep sequencing
1 reads, 1 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr6: 44403378-44403459 [+]
sense
OTTHUMT00000040743 ; CDC5L-001; intron 14
OTTHUMT00000040743 ; CDC5L-001; intron 14
OTTHUMT00000040743 ; CDC5L-001; intron 14
ENST00000371477 ; CDC5L-001; intron 14
ENST00000371477 ; CDC5L-001; intron 14
ENST00000371477 ; CDC5L-001; intron 14
Database links

Mature sequence hsa-miR-4642

Accession MIMAT0019702
Sequence

10 -  

auggcaucguccccugguggcu

 - 31

Get sequence
Deep sequencing 1 reads, 1 experiments
Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:21199797 "Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene" Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C Cancer Res. 71:78-86(2011).