Stem-loop sequence osa-MIR3982

Accession MI0017258
Description Oryza sativa miR3982 stem-loop
Stem-loop 
               c         a       a       cccuuuugcaggacagcguggugguaauauuguacuuagccccuuugagccacaguaccaccccgaa 
cgauguggcgcucca guaggcaac auuuugc uccggcc                                                                   a
||||||||||||||| ||||||||| ||||||| |||||||                                                                   c
gcugcaccgcgaggu cauccguug uaaaacg aggucgg                                                                   u
               a         a       c       aguagguuuuuaacgugaaucgaggaaacucgaggacacucccuccucccuaaaccccuaaagcccc
Get sequence
Deep sequencing
187 reads, 2 experiments
Genome context
Coordinates (MSU7) Overlapping transcripts
Chr11: 1384740-1384958 [-]
intergenic

Mature sequence osa-miR3982-5p

Accession MIMAT0019686
Sequence

8 -  

gcgcuccacguaggcaacaau

 - 28

Get sequence
Deep sequencing 105 reads, 2 experiments
Evidence experimental; Solexa [1]

Mature sequence osa-miR3982-3p

Accession MIMAT0019687
Sequence

194 -  

aguugccuacauggagcgcca

 - 214

Get sequence
Deep sequencing 82 reads, 2 experiments
Evidence experimental; Solexa [1]

References

1
PMID:21113019 "Identification and analysis of seven H(2)O(2)-responsive miRNAs and 32 new miRNAs in the seedlings of rice (Oryza sativa L. ssp. indica)" Li T, Li H, Zhang YX, Liu JY Nucleic Acids Res. 39:2821-2833(2011).