Stem-loop sequence osa-MIR3980a

Accession MI0017252
Description Oryza sativa miR3980a stem-loop
Gene family MIPF0001268; MIR3980
Stem-loop 
               ucu    c                    a      ggcgccuuccccuugagcucgggagacgcauucugcuuuggcuggg 
gcggcgucuuccucu   uccc uuaggagaaucgacggccuc gucagg                                              g
|||||||||||||||   |||| |||||||||||||||||||| ||||||                                              g
cgccgcagaaggaga   aggg gauccucuuagcugccggag cggucc                                              c
               ---    c                    c      ugcuucacagauuaaggccacugcuguucccgggcggccucggacg
Get sequence
Deep sequencing
1125 reads, 2 experiments

Mature sequence osa-miR3980a-5p

Accession MIMAT0019675
Sequence

31 -  

aaucgacggccucagucaggg

 - 51

Get sequence
Deep sequencing 830 reads, 2 experiments
Evidence experimental; Solexa [1]

Mature sequence osa-miR3980a-3p

Accession MIMAT0019676
Sequence

147 -  

cuggccgaggccgucgauucu

 - 167

Get sequence
Deep sequencing 210 reads, 2 experiments
Evidence experimental; Solexa [1]

References

1
PMID:21113019 "Identification and analysis of seven H(2)O(2)-responsive miRNAs and 32 new miRNAs in the seedlings of rice (Oryza sativa L. ssp. indica)" Li T, Li H, Zhang YX, Liu JY Nucleic Acids Res. 39:2821-2833(2011).