Stem-loop sequence hsa-mir-3978

Accession MI0016996
Description Homo sapiens miR-3978 stem-loop
Stem-loop 
    u       -    au       ----    agccaaaauuagaagggcc 
ucag ggaaagc augc  ccagggu    gugg                   a
|||| ||||||| ||||  |||||||    ||||                    
aguu ucuuuug uacg  gguucca    cacc                   a
    u       c    --       acga    aucacccgguccaucuuaa
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Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chrX: 109325346-109325446 [+]
sense
OTTHUMT00000057896 ; TMEM164-001; intron 2
OTTHUMT00000057901 ; TMEM164-006; intron 2
OTTHUMT00000057896 ; TMEM164-001; intron 2
OTTHUMT00000057901 ; TMEM164-006; intron 2
OTTHUMT00000057896 ; TMEM164-001; intron 2
OTTHUMT00000057901 ; TMEM164-006; intron 2
OTTHUMT00000057898 ; TMEM164-003; intron 3
OTTHUMT00000057898 ; TMEM164-003; intron 3
OTTHUMT00000057898 ; TMEM164-003; intron 3
ENST00000288381 ; TMEM164-001; intron 2
ENST00000461715 ; TMEM164-006; intron 2
ENST00000501872 ; TMEM164-203; intron 2
ENST00000372072 ; TMEM164-202; intron 2
ENST00000288381 ; TMEM164-001; intron 2
ENST00000461715 ; TMEM164-006; intron 2
ENST00000501872 ; TMEM164-203; intron 2
ENST00000372072 ; TMEM164-202; intron 2
ENST00000288381 ; TMEM164-001; intron 2
ENST00000461715 ; TMEM164-006; intron 2
ENST00000372072 ; TMEM164-202; intron 2
ENST00000372073 ; TMEM164-003; intron 3
ENST00000372068 ; TMEM164-201; intron 3
ENST00000372073 ; TMEM164-003; intron 3
ENST00000372068 ; TMEM164-201; intron 3
ENST00000372073 ; TMEM164-003; intron 3
ENST00000372068 ; TMEM164-201; intron 3
Database links

Mature sequence hsa-miR-3978

Accession MIMAT0019363
Sequence

4 -  

guggaaagcaugcauccagggugu

 - 27

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Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:20876853 "Complete characterization of the microRNAome in a patient with acute myeloid leukemia" Ramsingh G, Koboldt DC, Trissal M, Chiappinelli KB, Wylie T, Koul S, Chang LW, Nagarajan R, Fehniger TA, Goodfellow P, Magrini V, Wilson RK, Ding L, Ley TJ, Mardis ER, Link DC Blood. 116:5316-5326(2010).