Stem-loop sequence hsa-mir-4536-1

Accession MI0016906
Previous IDs hsa-mir-4536
Description Homo sapiens miR-4536-1 stem-loop
Gene family MIPF0001319; mir-4536
Stem-loop 
                         ------------------    -cu    
augugguagauauaugcacgauaua                  uaua   gcc 
|||||||||||||||||||||||||                  ||||   || c
uacaccaucuauauacgugcuauau                  auau   cgu 
                         ccauacauacauacauac    uuu
Get sequence
Deep sequencing
2 reads, 2 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chrX: 55477928-55478015 [-]
intergenic
Clustered miRNAs
< 10kb from hsa-mir-4536-1
hsa-mir-4536-1 chrX: 55477928-55478015 [-]
hsa-mir-4536-2 chrX: 55477928-55478015 [+]
Database links

Mature sequence hsa-miR-4536-5p

Accession MIMAT0019078
Previous IDs hsa-miR-4536
Sequence

2 -  

ugugguagauauaugcacgau

 - 22

Get sequence
Evidence experimental; Solexa [1]
Predicted targets

Mature sequence hsa-miR-4536-3p

Accession MIMAT0020959
Sequence

68 -  

ucgugcauauaucuaccacau

 - 88

Get sequence
Deep sequencing 3 reads, 2 experiments
Evidence not experimental
Predicted targets

References

1
PMID:20733160 "Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs" Jima DD, Zhang J, Jacobs C, Richards KL, Dunphy CH, Choi WW, Au WY, Srivastava G, Czader MB, Rizzieri DA, Lagoo AS, Lugar PL, Mann KP, Flowers CR, Bernal-Mizrachi L, Naresh KN, Evens AM, Gordon LI, Luftig M, Friedman DR, Weinberg JB, Thompson MA, Gill JI, Blood. 116:e118-e127(2010).
2
PMID:21911355 "miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades" Friedlander MR, Mackowiak SD, Li N, Chen W, Rajewsky N Nucleic Acids Res. 40:37-52(2012).