Stem-loop sequence csi-MIR396a

Accession MI0016706
Description Citrus sinensis miR396a stem-loop
Gene family MIPF0000047; MIR396
Stem-loop 
------------------------c  --a         u   a c                  c   c   aauuuuccgaucgaua 
                         ga   gguccucuu gug u uuccacagcuuucuugaa ugu uug                c
                         ||   ||||||||| ||| | |||||||||||||||||| ||| |||                c
                         cu   uuaggagaa cau a aaggugucgaaagaacuu aca aac                g
cuagagauaguuuucucucuaacua  ggu         u   c a                  a   c   ccuuaauuaguacgug
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Mature sequence csi-miR396a

Accession MIMAT0018463
Sequence

21 -  

uuccacagcuuucuugaacug

 - 41

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Evidence experimental; Solexa [1]

References

1
PMID:20398412 "Discovery and comparative profiling of microRNAs in a sweet orange red-flesh mutant and its wild type" Xu Q, Liu Y, Zhu A, Wu X, Ye J, Yu K, Guo W, Deng X BMC Genomics. 11:246(2010).