Stem-loop sequence hsa-mir-3944

Accession MI0016601
Description Homo sapiens miR-3944 stem-loop
Stem-loop 
---uccacccag             u u           -a       ------   c 
            caggcgcaggucc g gcagcaggcca  ccgagaa      gcg c
            ||||||||||||| | |||||||||||  |||||||      |||  
            guccguguccagg c cgucguccggu  ggcuuuu      ugc u
gucguaauucua             c u           cg       acccuc   g
Get sequence
Deep sequencing
10 reads, 5 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr10: 135185060-135185167 [-]
sense
OTTHUMT00000051156 ; ECHS1-001; intron 1
OTTHUMT00000051156 ; ECHS1-001; intron 1
OTTHUMT00000051156 ; ECHS1-001; intron 1
ENST00000368547 ; ECHS1-001; intron 1
ENST00000368547 ; ECHS1-001; intron 1
ENST00000368547 ; ECHS1-001; intron 1
Database links

Mature sequence hsa-miR-3944-5p

Accession MIMAT0019231
Sequence

23 -  

ugugcagcaggccaaccgaga

 - 43

Get sequence
Deep sequencing 1 reads, 1 experiments
Evidence experimental; Solexa [2]
Predicted targets

Mature sequence hsa-miR-3944-3p

Accession MIMAT0018360
Previous IDs hsa-miR-3944
Sequence

63 -  

uucgggcuggccugcugcuccgg

 - 85

Get sequence
Deep sequencing 8 reads, 3 experiments
Evidence experimental; Solexa [1-2]
Predicted targets

References

1
PMID:20498841 "Deep sequencing of human nuclear and cytoplasmic small RNAs reveals an unexpectedly complex subcellular distribution of miRNAs and tRNA 3' trailers" Liao JY, Ma LM, Guo YH, Zhang YC, Zhou H, Shao P, Chen YQ, Qu LH PLoS One. 5:e10563(2010).
2
PMID:21199797 "Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene" Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C Cancer Res. 71:78-86(2011).