Stem-loop sequence hsa-mir-3939

Accession MI0016596
Description Homo sapiens miR-3939 stem-loop
Stem-loop 
--------c   cuuccaa     ucu     ---u      -a g  g          acc 
         ugg       aggcc   gugug    uccugu  u ug gcgugcacgu   u
         |||       |||||   |||||    ||||||  | || ||||||||||   g
         acc       uucgg   cacac    aggaca  a ac cgcaugugua   u
ucuacacaa   -------     --u     cugu      cc g  g          cac
Get sequence
Deep sequencing
1 reads, 1 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr6: 167411295-167411400 [-]
sense
OTTHUMT00000043098 ; RP1-167A14.2-001; intron 1
OTTHUMT00000043098 ; RP1-167A14.2-001; intron 1
OTTHUMT00000043098 ; RP1-167A14.2-001; intron 1
ENST00000444102 ; RP1-167A14.2-001; intron 1
ENST00000444102 ; RP1-167A14.2-001; intron 1
ENST00000444102 ; RP1-167A14.2-001; intron 1
Database links

Mature sequence hsa-miR-3939

Accession MIMAT0018355
Sequence

62 -  

uacgcgcagaccacaggauguc

 - 83

Get sequence
Deep sequencing 1 reads, 1 experiments
Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:20498841 "Deep sequencing of human nuclear and cytoplasmic small RNAs reveals an unexpectedly complex subcellular distribution of miRNAs and tRNA 3' trailers" Liao JY, Ma LM, Guo YH, Zhang YC, Zhou H, Shao P, Chen YQ, Qu LH PLoS One. 5:e10563(2010).