Stem-loop sequence hsa-mir-3936

Accession MI0016592
Description Homo sapiens miR-3936 stem-loop
Stem-loop 
--a  a uc  a         --ca            g      caaau  ----    u 
   ug u  ag gcaucuguc    gugucugcugua aucccu     cc    gugu u
   || |  || |||||||||    |||||||||||| ||||||     ||    ||||  
   ac g  uc cguagacag    cguagacgguau ugggga     gg    cgca g
acg  - gu  a         ccca            g      ---au  ucuu    g
Get sequence
Deep sequencing
10 reads, 4 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr5: 131701182-131701291 [-]
sense
OTTHUMT00000132650 ; AC034220.3-001; intron 2
OTTHUMT00000132652 ; AC034220.3-003; intron 2
OTTHUMT00000132650 ; AC034220.3-001; intron 2
OTTHUMT00000132652 ; AC034220.3-003; intron 2
OTTHUMT00000132650 ; AC034220.3-001; intron 2
OTTHUMT00000132652 ; AC034220.3-003; intron 2
ENST00000417795 ; AC034220.3-001; intron 2
ENST00000457998 ; AC034220.3-003; intron 2
ENST00000417795 ; AC034220.3-001; intron 2
ENST00000457998 ; AC034220.3-003; intron 2
ENST00000417795 ; AC034220.3-001; intron 2
ENST00000457998 ; AC034220.3-003; intron 2
Database links

Mature sequence hsa-miR-3936

Accession MIMAT0018351
Sequence

66 -  

uaagggguguauggcagaugca

 - 87

Get sequence
Deep sequencing 10 reads, 4 experiments
Evidence experimental; Solexa [1-3]
Predicted targets

References

1
PMID:20498841 "Deep sequencing of human nuclear and cytoplasmic small RNAs reveals an unexpectedly complex subcellular distribution of miRNAs and tRNA 3' trailers" Liao JY, Ma LM, Guo YH, Zhang YC, Zhou H, Shao P, Chen YQ, Qu LH PLoS One. 5:e10563(2010).
2
PMID:21199797 "Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene" Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C Cancer Res. 71:78-86(2011).
3
PMID:21606961 "Discovery of new microRNAs by small RNAome deep sequencing in childhood acute lymphoblastic leukemia" Schotte D, Moqadam FA, Lange-Turenhout EA, Chen C, van Ijcken WF, Pieters R, den Boer ML Leukemia. 25:1389-1399(2011).