Stem-loop sequence gma-MIR482b

Accession MI0016527
Description Glycine max miR482b stem-loop
Gene family MIPF0000403; MIR482
Stem-loop 
           -auu           uc    ag 
gguaugggggg    gggaaggaaua  caua  c
|||||||||||    |||||||||||  ||||  a
ccauacccucc    cccuucuuuau  guau  a
           acau           -c    aa
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Genome context
Coordinates (Phytozome5.0) Overlapping transcripts
Gm20: 35360325-35360393 [+]
intergenic

Mature sequence gma-miR482b-5p

Accession MIMAT0018286
Previous IDs gma-miR482b
Sequence

3 -  

uauggggggauugggaaggaau

 - 24

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Evidence experimental; Solexa [1,3], 454 [2]

Mature sequence gma-miR482b-3p

Accession MIMAT0020952
Sequence

48 -  

ucuucccuacaccucccauacc

 - 69

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Evidence experimental; Solexa [3]

References

1
PMID:20122185 "Prediction of novel miRNAs and associated target genes in Glycine max" Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G BMC Bioinformatics. 11 Suppl 1:S14(2010).
2
PMID:21504877 "MicroRNAs in the shoot apical meristem of soybean" Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL J Exp Bot. 62:2495-2506(2011).
3
PMID:21663675 "Identification of novel soybean microRNAs involved in abiotic and biotic stresses" Kulcheski FR, de Oliveira LF, Molina LG, Almerao MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimaraes FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R BMC Genomics. 12:307(2011).