Stem-loop sequence hsa-mir-3920

Accession

MI0016427

Description

Homo sapiens miR-3920 stem-loop

Stem-loop

            a               g           gu 
acugagugaggg gucagagaguuaaga aauuaguacag  g
|||||||||||| ||||||||||||||| |||||||||||   
ugacucacuccc cagucucucaauucu uuagucauguu  a
            c               a           ag 

Genome context

• Coordinates (GRCh37.p5): chr11: 101390551-101390636 [-]
• Overlapping transcripts:

  sense

  OTTHUMT00000394770 ; TRPC6-001; intron 1

  OTTHUMT00000394771 ; TRPC6-004; intron 1

  OTTHUMT00000394772 ; TRPC6-002; intron 1

  OTTHUMT00000394773 ; TRPC6-003; intron 1

  OTTHUMT00000394832 ; TRPC6-007; intron 1

  OTTHUMT00000394770 ; TRPC6-001; intron 1

  OTTHUMT00000394771 ; TRPC6-004; intron 1

  OTTHUMT00000394772 ; TRPC6-002; intron 1

  OTTHUMT00000394773 ; TRPC6-003; intron 1

  OTTHUMT00000394832 ; TRPC6-007; intron 1

  OTTHUMT00000394770 ; TRPC6-001; intron 1

  OTTHUMT00000394771 ; TRPC6-004; intron 1

  OTTHUMT00000394772 ; TRPC6-002; intron 1

  OTTHUMT00000394773 ; TRPC6-003; intron 1

  OTTHUMT00000394832 ; TRPC6-007; intron 1

  ENST00000344327 ; TRPC6-001; intron 1

  ENST00000532133 ; TRPC6-004; intron 1

  ENST00000348423 ; TRPC6-002; intron 1

  ENST00000360497 ; TRPC6-003; intron 1

  ENST00000526713 ; TRPC6-007; intron 1

  ENST00000344327 ; TRPC6-001; intron 1

  ENST00000532133 ; TRPC6-004; intron 1

  ENST00000348423 ; TRPC6-002; intron 1

  ENST00000360497 ; TRPC6-003; intron 1

  ENST00000526713 ; TRPC6-007; intron 1

  ENST00000344327 ; TRPC6-001; intron 1

  ENST00000532133 ; TRPC6-004; intron 1

  ENST00000348423 ; TRPC6-002; intron 1

  ENST00000360497 ; TRPC6-003; intron 1

  ENST00000526713 ; TRPC6-007; intron 1

Database links

• ENTREZGENE: 100500823;MIR3920

Mature sequence hsa-miR-3920

• Accession: MIMAT0018195
• Sequence: 51 - acugauuaucuuaacucucuga - 72
• Evidence: experimental; Solexa [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-3920
  • MIRDB:hsa-miR-3920
  • RNA22-HSA:hsa-miR-3920
  • TARGETMINER:hsa-miR-3920

References

1. PMID:20224791 "Discovery of novel microRNAs in female reproductive tract using next generation sequencing" Creighton CJ, Benham AL, Zhu H, Khan MF, Reid JG, Nagaraja AK, Fountain MD, Dziadek O, Han D, Ma L, Kim J, Hawkins SM, Anderson ML, Matzuk MM, Gunaratne PH PLoS One. 5:e9637(2010).