Stem-loop sequence hsa-mir-3150b

Accession MI0016426
Description Homo sapiens miR-3150b stem-loop
Gene family MIPF0001102; mir-3150
Stem-loop 
     a                 g       c    -    g 
gaggg aagcaggccaaccucga gaucucc cagc cuug c
||||| ||||||||||||||||| ||||||| |||| |||| g
cuccc uucguccgguuggagcu cuagagg gucg ggac u
     c                 g       a    u    u
Get sequence
Deep sequencing
3 reads, 1 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr8: 96085139-96085224 [-]
sense
OTTHUMT00000379663 ; RP11-320N21.1-003; intron 1
OTTHUMT00000379662 ; RP11-320N21.1-001; exon 1
OTTHUMT00000379663 ; RP11-320N21.1-003; intron 1
OTTHUMT00000379662 ; RP11-320N21.1-001; exon 1
OTTHUMT00000379663 ; RP11-320N21.1-003; intron 1
OTTHUMT00000379848 ; RP11-320N21.2-001; intron 3
OTTHUMT00000379848 ; RP11-320N21.2-001; intron 3
OTTHUMT00000379848 ; RP11-320N21.2-001; intron 3
ENST00000517864 ; RP11-320N21.1-003; intron 1
ENST00000501164 ; RP11-320N21.1-001; exon 1
ENST00000517864 ; RP11-320N21.1-003; intron 1
ENST00000501164 ; RP11-320N21.1-001; exon 1
ENST00000517864 ; RP11-320N21.1-003; intron 1
ENST00000518598 ; RP11-320N21.2-001; intron 3
ENST00000518598 ; RP11-320N21.2-001; intron 3
ENST00000518598 ; RP11-320N21.2-001; intron 3
antisense
OTTHUMT00000379952 ; C8orf38-016; intron 1
OTTHUMT00000379952 ; C8orf38-016; intron 1
OTTHUMT00000379952 ; C8orf38-016; intron 1
OTTHUMT00000379949 ; C8orf38-006; intron 9
OTTHUMT00000379949 ; C8orf38-006; intron 9
OTTHUMT00000379949 ; C8orf38-006; intron 9
ENST00000523184 ; C8orf38-016; intron 1
ENST00000523184 ; C8orf38-016; intron 1
ENST00000523184 ; NDUFAF6-016; intron 1
ENST00000520757 ; C8orf38-006; intron 9
ENST00000286687 ; C8orf38-201; intron 9
ENST00000520757 ; C8orf38-006; intron 9
ENST00000286687 ; C8orf38-201; intron 9
ENST00000520757 ; NDUFAF6-006; intron 9
ENST00000286687 ; NDUFAF6-201; intron 9
Clustered miRNAs
< 10kb from hsa-mir-3150b
hsa-mir-3150a chr8: 96085142-96085221 [+]
hsa-mir-3150b chr8: 96085139-96085224 [-]
Database links

Mature sequence hsa-miR-3150b-5p

Accession MIMAT0019226
Sequence

15 -  

caaccucgaggaucuccccagc

 - 36

Get sequence
Evidence experimental; Solexa [2-3]
Predicted targets

Mature sequence hsa-miR-3150b-3p

Accession MIMAT0018194
Previous IDs hsa-miR-3150b
Sequence

53 -  

ugaggagaucgucgagguugg

 - 73

Get sequence
Deep sequencing 3 reads, 1 experiments
Evidence experimental; Solexa [1-3]
Predicted targets

References

1
PMID:20224791 "Discovery of novel microRNAs in female reproductive tract using next generation sequencing" Creighton CJ, Benham AL, Zhu H, Khan MF, Reid JG, Nagaraja AK, Fountain MD, Dziadek O, Han D, Ma L, Kim J, Hawkins SM, Anderson ML, Matzuk MM, Gunaratne PH PLoS One. 5:e9637(2010).
2
PMID:21199797 "Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene" Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C Cancer Res. 71:78-86(2011).
3
PMID:21606961 "Discovery of new microRNAs by small RNAome deep sequencing in childhood acute lymphoblastic leukemia" Schotte D, Moqadam FA, Lange-Turenhout EA, Chen C, van Ijcken WF, Pieters R, den Boer ML Leukemia. 25:1389-1399(2011).