Stem-loop sequence hsa-mir-3911

Accession MI0016415
Description Homo sapiens miR-3911 stem-loop
Stem-loop 
     a    g  u u     cug      -    ag   ac    -agcuu    g 
gggug ggau ug g ggauc   gaggag gcag  aag  agug      gcca u
||||| |||| || | |||||   |||||| ||||  |||  ||||      ||||  
cccac ucua ac c cuuag   cucuuc cguc  uuc  ucac      uggu u
     g    g  - -     ---      g    cu   cu    aaccuu    c
Get sequence
Deep sequencing
6 reads, 3 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr9: 130452966-130453074 [-]
antisense
OTTHUMT00000054231 ; STXBP1-004; intron 6
OTTHUMT00000054231 ; STXBP1-004; intron 6
OTTHUMT00000054231 ; STXBP1-004; intron 6
OTTHUMT00000054229 ; STXBP1-002; intron 18
OTTHUMT00000054228 ; STXBP1-001; intron 19
OTTHUMT00000054229 ; STXBP1-002; 3'UTR (exon 19)
OTTHUMT00000054229 ; STXBP1-002; 3'UTR (exon 19)
OTTHUMT00000054228 ; STXBP1-001; exon 20
OTTHUMT00000054228 ; STXBP1-001; exon 20
ENST00000481942 ; STXBP1-004; intron 6
ENST00000481942 ; STXBP1-004; intron 6
ENST00000481942 ; STXBP1-004; intron 6
ENST00000541198 ; STXBP1-202; intron 14
ENST00000541198 ; STXBP1-202; exon 15
ENST00000373299 ; STXBP1-002; intron 18
ENST00000535154 ; STXBP1-201; intron 18
ENST00000373302 ; STXBP1-001; intron 19
ENST00000373299 ; STXBP1-002; 3'UTR (exon 19)
ENST00000535154 ; STXBP1-201; exon 19
ENST00000373299 ; STXBP1-002; 3'UTR (exon 19)
ENST00000373302 ; STXBP1-001; exon 20
ENST00000373302 ; STXBP1-001; exon 20
Database links

Mature sequence hsa-miR-3911

Accession MIMAT0018185
Sequence

12 -  

uguguggauccuggaggaggca

 - 33

Get sequence
Deep sequencing 5 reads, 2 experiments
Evidence experimental; Solexa [1-2]
Predicted targets

References

1
PMID:20224791 "Discovery of novel microRNAs in female reproductive tract using next generation sequencing" Creighton CJ, Benham AL, Zhu H, Khan MF, Reid JG, Nagaraja AK, Fountain MD, Dziadek O, Han D, Ma L, Kim J, Hawkins SM, Anderson ML, Matzuk MM, Gunaratne PH PLoS One. 5:e9637(2010).
2
PMID:21199797 "Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene" Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C Cancer Res. 71:78-86(2011).