Stem-loop sequence hsa-mir-3180-4

Accession MI0016408
Description Homo sapiens miR-3180-4 stem-loop
Gene family MIPF0000894; mir-3180
Stem-loop 
          --a       u    -c     aac   ---u     g a  u         -- -  g       g   ac 
gcuccgcccc   cgucgca gcgc  ccggg   gcg    ggggc g gc uccggaggc  c cc cucugcu ccg  c
||||||||||   ||||||| ||||  |||||   |||    ||||| | || |||||||||  | || ||||||| |||   
cgaggcgggg   gcggugu cgcg  ggucc   cgc    cccug c cg aggccuccg  g gg gaggcga ggu  c
          gaa       -    cu     ggu   uacu     a -  u         aa u  -       -   gu
Get sequence
Deep sequencing
2740 reads, 12 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr16: 15248707-15248859 [-]
antisense
OTTHUMT00000409550 ; RP11-1390J18.1-001; exon 1
OTTHUMT00000409550 ; RP11-1390J18.1-001; exon 1
OTTHUMT00000409550 ; MIR3180-4-001; exon 1
ENST00000552015 ; RP11-1390J18.1-001; exon 1
ENST00000552015 ; RP11-1390J18.1-001; exon 1
ENST00000552015 ; MIR3180-4-001; exon 1
Database links

Mature sequence hsa-miR-3180

Accession MIMAT0018178
Sequence

36 -  

uggggcggagcuuccggag

 - 54

Get sequence
Deep sequencing 5474 reads, 11 experiments
Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:20224791 "Discovery of novel microRNAs in female reproductive tract using next generation sequencing" Creighton CJ, Benham AL, Zhu H, Khan MF, Reid JG, Nagaraja AK, Fountain MD, Dziadek O, Han D, Ma L, Kim J, Hawkins SM, Anderson ML, Matzuk MM, Gunaratne PH PLoS One. 5:e9637(2010).