Stem-loop sequence tca-mir-3869

Accession MI0016363
Description Tribolium castaneum miR-3869 stem-loop
Stem-loop 
uaauu        au         aa     a      
     acugauag  ggucucgaa  gccuu uagcg 
     ||||||||  |||||||||  ||||| |||| a
     ugauuguc  ccagagcuu  cgggg guugu 
uccau        -c         -a     -
Get sequence
Deep sequencing
44348 reads, 2 experiments
Genome context
Coordinates (Tcas3.0) Overlapping transcripts
chrLG5: 18531393-18531464 [+]
intergenic
Clustered miRNAs
< 10kb from tca-mir-3869
tca-mir-3869 chrLG5: 18531393-18531464 [+]
tca-mir-3850 chrLG5: 18531941-18532096 [-]
Database links

Mature sequence tca-miR-3869-5p

Accession MIMAT0018830
Sequence

6 -  

acugauagauggucucgaaaagcc

 - 29

Get sequence
Deep sequencing 78 reads, 1 experiments
Evidence experimental; SOLID [1]

Mature sequence tca-miR-3869-3p

Accession MIMAT0018831
Sequence

48 -  

cauucgagaccccuguuaguuac

 - 70

Get sequence
Deep sequencing 44180 reads, 2 experiments
Evidence experimental; SOLID [1]

References

1
PMID:20817720 "Functional shifts in insect microRNA evolution" Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S Genome Biol Evol. 2:686-696(2010).