Stem-loop sequence tca-mir-989

Accession MI0016359
Description Tribolium castaneum miR-989 stem-loop
Stem-loop 
uuuuu      aa  u cc       g       a     cau  u 
     gcuccc  gg c  gccacua gucgcau acacg   ug c
     ||||||  || |  ||||||| ||||||| |||||   ||  
     ugaggg  uc g  uggugau cagugua ugugc   ac a
uccgu      ga  u ua       g       g     --c  a
Get sequence
Deep sequencing
3468 reads, 1 experiments
Genome context
Coordinates (Tcas3.0) Overlapping transcripts
chrLG4: 193538-193629 [+]
intergenic
Database links
  • ENTREZGENE: 100628404;Mir989

Mature sequence tca-miR-989-5p

Accession MIMAT0018822
Sequence

19 -  

cgccacuaggucgcauaacac

 - 39

Get sequence
Deep sequencing 334 reads, 1 experiments
Evidence experimental; SOLID [1]

Mature sequence tca-miR-989-3p

Accession MIMAT0018823
Sequence

55 -  

ugugaugugacguagugg

 - 72

Get sequence
Deep sequencing 3134 reads, 1 experiments
Evidence experimental; SOLID [1]

References

1
PMID:20817720 "Functional shifts in insect microRNA evolution" Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S Genome Biol Evol. 2:686-696(2010).