Stem-loop sequence tca-mir-3863

Accession MI0016352
Description Tribolium castaneum miR-3863 stem-loop
Stem-loop 
ugcca      ga     u            c    u    uuuga 
     gggugu  agaau gaucaaguagcg cgcu gguc     a
     ||||||  ||||| |||||||||||| |||| ||||      
     ccuacg  ucuua cuaguucguugc gcga cuag     u
uaaca      uc     c            u    -    uuagu
Get sequence
Deep sequencing
2258 reads, 2 experiments
Genome context
Coordinates (Tcas3.0) Overlapping transcripts
chrLG9: 18989446-18989538 [+]
intergenic
Clustered miRNAs
< 10kb from tca-mir-3863
tca-mir-3862 chrLG9: 18989340-18989429 [+]
tca-mir-3863 chrLG9: 18989446-18989538 [+]
Database links

Mature sequence tca-miR-3863-5p

Accession MIMAT0018808
Sequence

19 -  

ugaucaaguagcgccgcuugguc

 - 41

Get sequence
Deep sequencing 556 reads, 2 experiments
Evidence experimental; SOLID [1]

Mature sequence tca-miR-3863-3p

Accession MIMAT0018809
Sequence

56 -  

ucagcgucguugcuugauccau

 - 77

Get sequence
Deep sequencing 1698 reads, 2 experiments
Evidence experimental; SOLID [1]

References

1
PMID:20817720 "Functional shifts in insect microRNA evolution" Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S Genome Biol Evol. 2:686-696(2010).