Stem-loop sequence tca-mir-3851f

AccessionMI0016340 (change log)
DescriptionTribolium castaneum miR-3851f stem-loop
Gene family MIPF0001201; mir-3851
Stem-loop
   u       -    gc c  c            u     g   guuuuu 
5'  guuugaa uuug  g cg guugauuuggag cguac aug      g
    ||||||| ||||  | || |||||||||||| ||||| |||       
3'  uaaauuu aaac  u gc cagcuaagccuu gcaug uac      g
   -       u    aa u  u            -     a   acucau 
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Tcas4.0) Overlapping transcripts
ChLG6: 8929279-8929373 [-]
intergenic
Clustered miRNAs
< 10kb from tca-mir-3851f
tca-mir-11624dChLG6: 8930530-8930621 [-]
tca-mir-3851eChLG6: 8930351-8930445 [-]
tca-mir-3851d-2ChLG6: 8930246-8930336 [-]
tca-mir-3858a-2ChLG6: 8930130-8930244 [-]
tca-mir-11624b-2ChLG6: 8929472-8929532 [-]
tca-mir-3851fChLG6: 8929279-8929373 [-]
tca-mir-3851hChLG6: 8929175-8929264 [-]
tca-mir-3858ChLG6: 8929084-8929152 [-]
Database links

Mature sequence tca-miR-3851f-5p

Accession MIMAT0018784
Sequence

19 - 

cguugauuuggagucgua

 - 36

Get sequence
Evidence experimental; SOLID [1]
Database links

Mature sequence tca-miR-3851f-3p

Accession MIMAT0018785
Sequence

58 - 

uaguacguuccgaaucgacucg

 - 79

Get sequence
Evidence experimental; SOLID [1]
Database links

References

1
PMID:20817720 "Functional shifts in insect microRNA evolution" Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S Genome Biol Evol. 2:686-696(2010).