Stem-loop sequence tca-mir-3850

AccessionMI0016324 (change log)
DescriptionTribolium castaneum miR-3850 stem-loop
Stem-loop
   guaau    ------------     --u    u                aaac  g   gag   a uc    aa      - aa 
5'      ugca            uuuga   agau aggccgauauuagucu    aa guu   acu u  uaua  uuauua c  a
        ||||            |||||   |||| ||||||||||||||||    || |||   ||| |  ||||  |||||| |   
3'      acgu            aagcu   uuua uuugguuguaaucaga    uu uaa   uga g  auau  aauaau g  a
   aaaau    uuuuuuucauaa     cau    c                --gc  g   -aa   c ga    gg      c cu 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Tcas4.0) Overlapping transcripts
ChLG5: 14293865-14294020 [-]
intergenic
Clustered miRNAs
< 10kb from tca-mir-3850
tca-mir-3850ChLG5: 14293865-14294020 [-]
tca-mir-3869ChLG5: 14293317-14293388 [+]
Database links

Mature sequence tca-miR-3850-5p

Accession MIMAT0018754
Sequence

21 - 

aggccgauauuagucuaa

 - 38

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Evidence experimental; SOLID [1]
Database links

Mature sequence tca-miR-3850-3p

Accession MIMAT0018755
Sequence

103 - 

uucgagacuaauguuggu

 - 120

Get sequence
Evidence experimental; SOLID [1]
Database links

References

1
PMID:20817720 "Functional shifts in insect microRNA evolution" Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S Genome Biol Evol. 2:686-696(2010).