Stem-loop sequence tca-mir-3848

Accession MI0016319
Description Tribolium castaneum miR-3848 stem-loop
Stem-loop 
uauua   gc    -    gc       a    ---        u 
     ucc  ucua ugua  gguauau aggu   uagcgcgc g
     |||  |||| ||||  ||||||| ||||   |||||||| a
     agg  aggu acau  ucgugua uuca   auugugcg c
-uuaa   -a    u    --       a    ccc        c
Get sequence
Deep sequencing
54 reads, 2 experiments
Genome context
Coordinates (Tcas3.0) Overlapping transcripts
chrLG3: 9556447-9556531 [-]
intergenic
Database links

Mature sequence tca-miR-3848-5p

Accession MIMAT0018744
Sequence

16 -  

guagcgguauauaagguua

 - 34

Get sequence
Deep sequencing 44 reads, 2 experiments
Evidence experimental; SOLID [1]

Mature sequence tca-miR-3848-3p

Accession MIMAT0018745
Sequence

51 -  

uuacccacuuaaugugcuua

 - 70

Get sequence
Deep sequencing 4 reads, 1 experiments
Evidence experimental; SOLID [1]

References

1
PMID:20817720 "Functional shifts in insect microRNA evolution" Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S Genome Biol Evol. 2:686-696(2010).