Stem-loop sequence tca-mir-3846

Accession MI0016317
Description Tribolium castaneum miR-3846 stem-loop
Stem-loop 
---   aua      c  -    ------       a  aa   uucuu   uuauaa  cu     -    g 
   gga   gaguua uu ccau      ugaugau gu  aug     ggc      gu  uugug ucaa a
   |||   |||||| || ||||      ||||||| ||  |||     |||      ||  ||||| |||| a
   ccu   cuuaau aa ggua      acuacug ca  uac     ccg      ca  aacac aguu u
uaa   ---      c  c    caguca       -  gc   uaacu   ---uug  uu     c    a
Get sequence
Deep sequencing
182 reads, 2 experiments
Genome context
Coordinates (Tcas3.0) Overlapping transcripts
chrLG3: 19764596-19764726 [-]
intergenic
Database links

Mature sequence tca-miR-3846-5p

Accession MIMAT0018740
Sequence

33 -  

uguucuuggcuuauaagucuuugugu

 - 58

Get sequence
Deep sequencing 34 reads, 1 experiments
Evidence experimental; SOLID [1]

Mature sequence tca-miR-3846-3p

Accession MIMAT0018741
Sequence

68 -  

ugaccacaauuacguugccuca

 - 89

Get sequence
Deep sequencing 118 reads, 2 experiments
Evidence experimental; SOLID [1]

References

1
PMID:20817720 "Functional shifts in insect microRNA evolution" Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S Genome Biol Evol. 2:686-696(2010).