Stem-loop sequence tca-mir-2796

Accession MI0016303
Description Tribolium castaneum miR-2796 stem-loop
Gene family MIPF0001057; mir-2796
Stem-loop 
aucga  uu   g  - -a        uauuaac      --   c         -       u       c    ggaua 
     gc  ucg ug c  gaagccgc       guggug  acg aagaguagg gguuucu ucggccu cagc     a
     ||  ||| || |  ||||||||       ||||||  ||| ||||||||| ||||||| ||||||| ||||      
     cg  agu ac g  cuucggcg       cauuac  ugc uuuucguuc ucaaagg ggccgga guug     u
uuuug  -u   a  u cc        ucgcuuc      gu   a         a       c       u    agaaa
Get sequence
Deep sequencing
5018 reads, 2 experiments
Genome context
Coordinates (Tcas3.0) Overlapping transcripts
chrLG2: 19363957-19364114 [-]
intergenic
Database links

Mature sequence tca-miR-2796-5p

Accession MIMAT0018712
Sequence

49 -  

agggguuucuuucggccuccagcg

 - 72

Get sequence
Deep sequencing 554 reads, 2 experiments
Evidence experimental; SOLID [1]

Mature sequence tca-miR-2796-3p

Accession MIMAT0018713
Sequence

87 -  

guaggccggcggaaacuacuugc

 - 109

Get sequence
Deep sequencing 4460 reads, 2 experiments
Evidence experimental; SOLID [1]

References

1
PMID:20817720 "Functional shifts in insect microRNA evolution" Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S Genome Biol Evol. 2:686-696(2010).