Stem-loop sequence tca-mir-3810

AccessionMI0016267 (change log)
DescriptionTribolium castaneum miR-3810 stem-loop
Stem-loop
   aaaua  a  u    uc    u     --uuua      uu       u  u 
5'      ga ga aaug  cgau uguag      cacgaa  ugguccu uu u
        || || ||||  |||| |||||      ||||||  ||||||| ||  
3'      cu uu uuac  gcua acauc      gugcuu  acuagga aa u
   cugca  g  u    gu    c     uaaugg      --       u  u 
Get sequence
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (Tcas4.0) Overlapping transcripts
ChLGX: 5790589-5790690 [-]
intergenic
Clustered miRNAs
< 10kb from tca-mir-3810
tca-mir-3809ChLGX: 5796225-5796317 [-]
tca-mir-3825ChLGX: 5796077-5796171 [-]
tca-mir-3821ChLGX: 5795772-5795863 [-]
tca-mir-3818ChLGX: 5795452-5795544 [-]
tca-mir-11635ChLGX: 5795359-5795417 [-]
tca-mir-3813ChLGX: 5794687-5794779 [-]
tca-mir-3820ChLGX: 5794461-5794553 [-]
tca-mir-3814ChLGX: 5794132-5794223 [-]
tca-mir-6007ChLGX: 5790992-5791078 [-]
tca-mir-3810ChLGX: 5790589-5790690 [-]
tca-mir-3829ChLGX: 5788970-5789059 [-]
tca-mir-11636ChLGX: 5788871-5788927 [-]
tca-mir-3807ChLGX: 5788508-5788606 [-]
tca-mir-3815ChLGX: 5788162-5788256 [-]
tca-mir-3822ChLGX: 5787677-5787839 [-]
tca-mir-3812ChLGX: 5787259-5787378 [-]
tca-mir-3816ChLGX: 5787077-5787248 [-]
tca-mir-3826ChLGX: 5786920-5787032 [-]
tca-mir-3817ChLGX: 5786631-5786746 [-]
tca-mir-3828ChLGX: 5786420-5786520 [-]
tca-mir-3808ChLGX: 5786212-5786323 [-]
tca-mir-3811a-1ChLGX: 5785640-5785736 [-]
tca-mir-3806b-1ChLGX: 5785511-5785608 [-]
tca-mir-3811a-5ChLGX: 5785317-5785402 [-]
tca-mir-3806b-2ChLGX: 5785190-5785283 [-]
tca-mir-3811a-4ChLGX: 5784984-5785080 [-]
tca-mir-3806b-3ChLGX: 5784819-5784992 [-]
tca-mir-3811a-2ChLGX: 5784649-5784745 [-]
tca-mir-3806cChLGX: 5784537-5784597 [-]
tca-mir-3811a-3ChLGX: 5784317-5784420 [-]
tca-mir-3806b-4ChLGX: 5784181-5784306 [-]
tca-mir-3805bChLGX: 5783977-5784080 [-]
tca-mir-3811bChLGX: 5783739-5783850 [-]
tca-mir-3806ChLGX: 5783512-5783657 [-]
tca-mir-3805aChLGX: 5783347-5783442 [-]
tca-mir-3824ChLGX: 5781786-5781882 [-]
tca-mir-3823ChLGX: 5781595-5781685 [-]
Database links

Mature sequence tca-miR-3810-5p

Accession MIMAT0018642
Sequence

23 - 

uguaguuuacacgaauuugguccu

 - 46

Get sequence
Evidence experimental; SOLID [1]
Database links

Mature sequence tca-miR-3810-3p

Accession MIMAT0018643
Sequence

60 - 

aucauucguggguaaucuacac

 - 81

Get sequence
Evidence experimental; SOLID [1]
Database links

References

1
PMID:20817720 "Functional shifts in insect microRNA evolution" Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S Genome Biol Evol. 2:686-696(2010).