Stem-loop sequence tca-mir-3804a

Accession MI0016258
Description Tribolium castaneum miR-3804a stem-loop
Gene family MIPF0001255; mir-3804
Stem-loop 
auauu           auca   ucc       u    cu 
     uuuuggcacac    aug   acguuuu guga  u
     |||||||||||    |||   ||||||| ||||   
     aagaucgugug    uac   uguaaag cgcu  g
ccaac           --aa   -cu       u    ua
Get sequence
Deep sequencing
152 reads, 2 experiments
Genome context
Coordinates (Tcas3.0) Overlapping transcripts
chrLG10: 7547882-7547960 [-]
intergenic
Clustered miRNAs
< 10kb from tca-mir-3804a
tca-mir-3804b chrLG10: 7551723-7551823 [-]
tca-mir-3804a chrLG10: 7547882-7547960 [-]
Database links

Mature sequence tca-miR-3804a-5p

Accession MIMAT0018624
Sequence

9 -  

uggcacacaucaauguccacguuuuu

 - 34

Get sequence
Deep sequencing 136 reads, 2 experiments
Evidence experimental; SOLID [1]

Mature sequence tca-miR-3804a-3p

Accession MIMAT0018625
Sequence

53 -  

auguuccauaagugugcuagaac

 - 75

Get sequence
Deep sequencing 14 reads, 2 experiments
Evidence experimental; SOLID [1]

References

1
PMID:20817720 "Functional shifts in insect microRNA evolution" Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S Genome Biol Evol. 2:686-696(2010).