Stem-loop sequence mghv-mir-M1-11

Accession MI0016251
Description Mouse gammaherpesvirus 68 miR-M1-11 stem-loop
Stem-loop 
                        a 
gacagcugucagggguuacaugag g
|||||||||||||||||||||||| a
cugucgacaguccccaauguacuu a
                        c
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Genome context
Coordinates (EMBL:U97553.1) Overlapping transcripts
U97553: 759-811 [+]
intergenic
Clustered miRNAs
< 10kb from mghv-mir-M1-11
mghv-mir-M1-1 U97553: 196-260 [+]
mghv-mir-M1-10 U97553: 262-322 [+]
mghv-mir-M1-2 U97553: 562-627 [+]
mghv-mir-M1-3 U97553: 638-698 [+]
mghv-mir-M1-11 U97553: 759-811 [+]
mghv-mir-M1-4 U97553: 956-1049 [+]
mghv-mir-M1-5 U97553: 1255-1314 [+]
mghv-mir-M1-6 U97553: 1319-1381 [+]
mghv-mir-M1-7 U97553: 1660-1719 [+]
mghv-mir-M1-12 U97553: 1720-1789 [+]
mghv-mir-M1-8 U97553: 3806-3876 [+]
mghv-mir-M1-14 U97553: 5102-5161 [+]
mghv-mir-M1-15 U97553: 5461-5514 [+]
mghv-mir-M1-9 U97553: 5525-5584 [+]

Mature sequence mghv-miR-M1-11-5p

Accession MIMAT0018168
Sequence

4 -  

agcugucagggguuacaug

 - 22

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Evidence experimental; 454 [1]

Mature sequence mghv-miR-M1-11-3p

Accession MIMAT0018169
Sequence

34 -  

uguaaccccugacagcuguc

 - 53

Get sequence
Evidence experimental; 454 [1]

References

1
PMID:20668074 "Identification and analysis of expression of novel microRNAs of murine gammaherpesvirus 68" Zhu JY, Strehle M, Frohn A, Kremmer E, Hofig KP, Meister G, Adler H J Virol. 84:10266-10275(2010).