Stem-loop sequence ame-mir-3800

Accession MI0016217
Description Apis mellifera miR-3800 stem-loop
Stem-loop 
--uac     uc    c   ga u      -c    ac  uccuuaa       uaaau 
     ugugg  caca guu  c gucucg  ggcc  gu       aaggcgg     c
     |||||  |||| |||  | ||||||  ||||  ||       |||||||     a
     auacc  gugu uag  g cggagc  ccgg  ca       uuccgcu     c
aauac     --    -   uc c      ca    -c  uuuuucc       uugcg
Get sequence
Deep sequencing
12 reads, 1 experiments
Genome context
Coordinates (Amel_4.0) Overlapping transcripts
Group2.34: 113824-113937 [+]
intergenic
Database links

Mature sequence ame-miR-3800

Accession MIMAT0018587
Sequence

88 -  

cgaggccgcugauugugccaua

 - 109

Get sequence
Deep sequencing 2 reads, 1 experiments
Evidence experimental; SOLID [1]

References

1
PMID:20807255 "Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera" Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F Insect Mol Biol. 19:799-805(2010).