Stem-loop sequence ame-mir-3796

Accession MI0016211
Description Apis mellifera miR-3796 stem-loop
Stem-loop 
u  -  -   ----g      a          --g     g   ------    a   -uua      a 
 cc au cgu     acgaau uucuucucuc   gggau cga      cucg gag    ucgggu a
 || || |||     |||||| ||||||||||   ||||| |||      |||| |||    |||||| u
 gg ua gca     uguuua gagaggaggg   uccua gcu      gagu uuc    gguucg u
u  c  u   guuaa      g          gaa     -   uaguuu    a   uuug      a
Get sequence
Deep sequencing
1 reads, 1 experiments
Genome context
Coordinates (Amel_4.0) Overlapping transcripts
Group16.7: 437996-438120 [-]
intergenic
Database links

Mature sequence ame-miR-3796

Accession MIMAT0018581
Sequence

85 -  

gauccuaaggggaggagaggauuu

 - 108

Get sequence
Evidence experimental; SOLID [1]

References

1
PMID:20807255 "Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera" Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F Insect Mol Biol. 19:799-805(2010).